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S13_scaffold_467_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_467_curated_1
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(574..1737)
DNA (1164bp) protein (388aa)
Putative glycosyltransferase protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q128_RHIE6 rbh
glycosyltransferase rbh
Putative glycosyltransferase protein {ECO:0000313|EMBL:ACE93384.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
S13_scaffold_467_curated_2
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1734..2999)
DNA (1266bp) protein (422aa)
Glucosyltransferase n=1 Tax=Ahrensia sp. R2A130 RepID=E0MSE2_9RHOB rbh
Glucosyltransferase {ECO:0000313|EMBL:EFL88060.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;"
group 1 glycosyl transferase rbh
S13_scaffold_467_curated_3
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2996..4219)
DNA (1224bp) protein (408aa)
Membrane-anchored protein n=1 Tax=Ahrensia sp. R2A130 RepID=E0MSE3_9RHOB rbh
Membrane-anchored protein {ECO:0000313|EMBL:EFL88061.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;"
membrane-anchored protein rbh
S13_scaffold_467_curated_4

Not on your lists

4639..5766
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036C890D rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48894.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein rbh
S13_scaffold_467_curated_5
Mesorhizobium sp. LSJC265A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5776..7560)
DNA (1785bp) protein (595aa)
AMP-binding protein (EC:2.3.1.86) rbh
UPI0003CF681F related cluster n=1 Tax=unknown RepID=UPI0003CF681F rbh
AMP-binding protein {ECO:0000313|EMBL:ESX14737.1}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;"
S13_scaffold_467_curated_6
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7577..10000)
DNA (2424bp) protein (808aa)
Amidase n=1 Tax=Osedax symbiont Rs1 RepID=S6GHB8_9GAMM rbh
Amidase {ECO:0000313|EMBL:EPJ47515.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs1.;"
amidase rbh
S13_scaffold_467_curated_7
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10005..10721)
DNA (717bp) protein (239aa)
ABC-type transport system ATP-binding protein II (Probable substrates urea/short chain-amides) n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EYG5_9RHOB rbh
Urea ABC transporter {ECO:0000313|EMBL:KGM49999.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
Putative branched-chain amino acid ABC transporter, ATP-binding protein
S13_scaffold_467_curated_8
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10714..11742)
DNA (1029bp) protein (343aa)
Inner-membrane translocator n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EYG6_9RHOB rbh
Inner-membrane translocator {ECO:0000313|EMBL:EBA15434.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK209-2-6.;"
inner-membrane translocator rbh
S13_scaffold_467_curated_9
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11742..12608)
DNA (867bp) protein (289aa)
ABC-type urea transport system, permease protein I n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6ATM2_9RHOB rbh
ABC-type urea transport system, permease protein I {ECO:0000313|EMBL:EDZ42662.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC2083.;"
branched-chain amino acid ABC transporter, permease protein rbh
S13_scaffold_467_curated_10
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12837..14069)
DNA (1233bp) protein (411aa)
ABC-type urea transport system, substrate-binding protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6ATM1_9RHOB rbh
ABC-type urea transport system, substrate-binding protein {ECO:0000313|EMBL:EDZ41399.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC2083.;"
extracellular ligand-binding receptor rbh
S13_scaffold_467_curated_11
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14105..15703)
DNA (1599bp) protein (533aa)
Band 7 protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EYG9_9RHOB rbh
Band 7 protein {ECO:0000313|EMBL:EBA15437.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK209-2-6.;"
Inner membrane protein YqiK
S13_scaffold_467_curated_12
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15846..17030)
DNA (1185bp) protein (395aa)
Putative regulatory protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0K7_9RHOB rbh
Regulatory protein {ECO:0000313|EMBL:KGM50004.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
putative bacterial extracellular solute-binding protein rbh
S13_scaffold_467_curated_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17097..17543
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XM65_VARPD
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AGU53688.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
S13_scaffold_467_curated_14
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17620..18174)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B68B5D
Uncharacterized protein {ECO:0000313|EMBL:CDX13663.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
S13_scaffold_467_curated_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18167..20971)
DNA (2805bp) protein (935aa)
(2Fe-2S)-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B51202 rbh
Sarcosine oxidase alpha subunit {ECO:0000313|EMBL:CDX14026.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
sarcosine oxidase subunit alpha rbh
S13_scaffold_467_curated_16
unknown

Not on your lists

comp(20968..21171)
DNA (204bp) protein (68aa)

This feature has no annotations

S13_scaffold_467_curated_17
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21168..21431)
DNA (264bp) protein (88aa)
Sarcosine oxidase, delta subunit family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7XZB5_MESOW
sarcosine oxidase subunit delta family protein
Sarcosine oxidase, delta subunit family {ECO:0000313|EMBL:AEH84760.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
S13_scaffold_467_curated_18
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21440..22693)
DNA (1254bp) protein (418aa)
sarcosine oxidase subunit beta n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B492E4 rbh
sarcosine oxidase subunit beta rbh
Sarcosine oxidase beta subunit {ECO:0000313|EMBL:BAB51716.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S13_scaffold_467_curated_19
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22832..23827)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C717_9RHIZ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM77619.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
Displaying 19 items

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