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S13_scaffold_630_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_630_curated_1
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1367)
DNA (1365bp) protein (455aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036FD086 rbh
RNA-binding S4 domain-containing protein rbh
S13_scaffold_630_curated_2
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1437..1895
DNA (459bp) protein (153aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
tRNA-specific adenosine deaminase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FA39_9RHIZ
nitrogen fixation protein gene
S13_scaffold_630_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1933..2622)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E79EB0
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55485.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S13_scaffold_630_curated_4
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2797..6006)
DNA (3210bp) protein (1070aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
Isoleucine--tRNA ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUV6_9RHIZ rbh
ileS; isoleucyl-tRNA synthetase rbh
S13_scaffold_630_curated_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6244..7047)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EPW0_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV06173.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
outer membrane protein V rbh
S13_scaffold_630_curated_6
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7148..7882)
DNA (735bp) protein (245aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G3R5_9RHIZ
Short-chain dehydrogenase {ECO:0000313|EMBL:KGF68563.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
short-chain dehydrogenase/reductase SDR
S13_scaffold_630_curated_7
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7879..8583)
DNA (705bp) protein (235aa)
Short chain dehydrogenase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D0E1_9RHIZ
Short-chain dehydrogenase of various substrate specificity, 17beta-HSD-like-protein {ECO:0000313|EMBL:EDQ34979.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
short-chain dehydrogenase/reductase SDR
S13_scaffold_630_curated_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8647..9639)
DNA (993bp) protein (331aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Bifunctional riboflavin kinase/FMN adenylyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUV3_9RHIZ rbh
riboflavin biosynthesis protein RibF rbh
S13_scaffold_630_curated_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9649..10509)
DNA (861bp) protein (287aa)
HAD family hydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035CFD4B rbh
HAD family hydrolase {ECO:0000313|EMBL:EHK55480.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
HAD family hydrolase rbh
S13_scaffold_630_curated_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10671..11876
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUV1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55479.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S13_scaffold_630_curated_11
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11986..13887
DNA (1902bp) protein (634aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N9B0_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF20708.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Flp pilus assembly protein TadG rbh
S13_scaffold_630_curated_12
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13967..14758)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F2X1_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV06166.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein rbh
S13_scaffold_630_curated_13
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15031..15327
DNA (297bp) protein (99aa)
molecular chaperone GroES n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030C2D8C
Chaperonin Cpn10
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
S13_scaffold_630_curated_14

Not on your lists

15390..15584
DNA (195bp) protein (65aa)
60 kDa chaperonin n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7D4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KKN61092.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
groEL; molecular chaperone GroEL
Displaying 14 items

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