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S13_scaffold_242_curated

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_242_curated_1
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148..1419)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GYB9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EPR18843.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
hypothetical protein rbh
S13_scaffold_242_curated_2
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1439..2218)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2IDT7_9RHOB rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ03458.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
ABC transporter ATP-binding protein
S13_scaffold_242_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2735..4048)
DNA (1314bp) protein (438aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
PREDICTED: serine hydroxymethyltransferase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C10E48 rbh
glycine/serine hydroxymethyltransferase rbh
S13_scaffold_242_curated_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4205..4432)
DNA (228bp) protein (76aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC78439.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
S13_scaffold_242_curated_5
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4582..4854)
DNA (273bp) protein (91aa)
30S ribosomal protein S21 n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VDL7_9RHIZ
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
30S ribosomal protein S21
S13_scaffold_242_curated_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5247..6500)
DNA (1254bp) protein (418aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSI3_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56302.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ErfK/YbiS/YcfS/YnhG family protein rbh
S13_scaffold_242_curated_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6799..7314)
DNA (516bp) protein (172aa)
MarR family transcription regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSI2_9RHIZ rbh
MarR family transcription regulator {ECO:0000313|EMBL:EHK56301.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
MarR family transcriptional regulator rbh
S13_scaffold_242_curated_8
Mesorhizobium sp. L2C067A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7484..7906)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035EE221
Uncharacterized protein {ECO:0000313|EMBL:ESZ33786.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
hypothetical protein
S13_scaffold_242_curated_9
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7903..8949)
DNA (1047bp) protein (349aa)
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial {ECO:0000313|EMBL:CDX31958.1}; EC=3.1.2.4 {ECO:0000313|EMBL:CDX31958.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C12DF7 rbh
enoyl-CoA hydratase/isomerase rbh
S13_scaffold_242_curated_10
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9087..10115
DNA (1029bp) protein (343aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
Porphobilinogen synthase (EC:4.2.1.24) rbh
Delta-aminolevulinic acid dehydratase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FR21_9RHIZ rbh
S13_scaffold_242_curated_11
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10112..10765)
DNA (654bp) protein (218aa)
Glutathione S-transferase n=1 Tax=Rhizobium sp. CF080 RepID=J2IZF7_9RHIZ rbh
Glutathione S-transferase {ECO:0000313|EMBL:CDX31950.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
Glutathione S-transferase
S13_scaffold_242_curated_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10873..12087
DNA (1215bp) protein (405aa)
poly(3-hydroxybutyrate) depolymerase n=1 Tax=Rhizobium gallicum RepID=UPI00036B5334 rbh
putative intracellular PHB depolymerase rbh
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:EJC70844.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
S13_scaffold_242_curated_13
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12185..12991
DNA (807bp) protein (269aa)
DNA polymerase beta-like protein n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28S48_JANSC rbh
DNA polymerase III subunit beta {ECO:0000313|EMBL:KIF42876.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
DNA polymerase, beta-like rbh
S13_scaffold_242_curated_14
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13061..13408
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8THG0_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV13606.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S13_scaffold_242_curated_15
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13693..14163
DNA (471bp) protein (157aa)
membrane protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000301A60B
RDD domain-containing protein
RDD domain containing protein {ECO:0000313|EMBL:ADV13613.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S13_scaffold_242_curated_16
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14318..15076
DNA (759bp) protein (253aa)
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
arginyl-tRNA-protein transferase (EC:2.3.2.8) rbh
Putative arginyl-tRNA--protein transferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y906_9RHIZ rbh
S13_scaffold_242_curated_17
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15189..16085
DNA (897bp) protein (299aa)
UPI0003CF41A5 related cluster n=1 Tax=unknown RepID=UPI0003CF41A5 rbh
Membrane protein {ECO:0000313|EMBL:ESW92604.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein rbh
S13_scaffold_242_curated_18
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16139..16636)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI000365AE97
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
S13_scaffold_242_curated_19
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16633..16968)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZLR2_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
S13_scaffold_242_curated_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17062..20202)
DNA (3141bp) protein (1047aa)
Acriflavin resistance protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSI4_9RHIZ rbh
Acriflavin resistance protein {ECO:0000313|EMBL:EHK56303.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
acriflavin resistance protein rbh
S13_scaffold_242_curated_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20199..21410)
DNA (1212bp) protein (404aa)
Hemolysin D n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSI5_9RHIZ rbh
Hemolysin D {ECO:0000313|EMBL:EHK56304.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
RND family efflux transporter protein
S13_scaffold_242_curated_22
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21440..22129)
DNA (690bp) protein (230aa)
TetR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSI6_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:EHK56305.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
TetR family transcriptional regulator
S13_scaffold_242_curated_23
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22387..23913)
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D5J0_9RHIZ rbh
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KGF70245.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
deoxyribodipyrimidine photolyase-like protein rbh
S13_scaffold_242_curated_24
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24063..24542
DNA (480bp) protein (160aa)
endoribonuclease L-PSP n=1 Tax=Burkholderia ubonensis RepID=UPI00016A55EB
Endoribonuclease {ECO:0000313|EMBL:CDP87072.1}; TaxID=1802 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
endoribonuclease L-PSP family protein
S13_scaffold_242_curated_25
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

24633..24887
DNA (255bp) protein (85aa)
Prevent-host-death family protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QE23_9CYAN
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:AGY57212.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
S13_scaffold_242_curated_26
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

24884..25141
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QEB1_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY57213.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
S13_scaffold_242_curated_27
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25350..27614)
DNA (2265bp) protein (755aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
UPI0003CF657B related cluster n=1 Tax=unknown RepID=UPI0003CF657B rbh
DNA topoisomerase IV, A subunit, proteobacterial rbh
S13_scaffold_242_curated_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27908..29095
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSJ0_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56309.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
S13_scaffold_242_curated_29

Not on your lists

comp(29173..29811)
DNA (639bp) protein (213aa)
pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=2 Tax=Pyrococcus furiosus RepID=PCP_PYRFU
Uncharacterized protein {ECO:0000313|EMBL:KKN83469.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S13_scaffold_242_curated_30
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29835..31679)
DNA (1845bp) protein (615aa)
UPI0003D00110 related cluster n=1 Tax=unknown RepID=UPI0003D00110 rbh
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ESZ35079.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
aspartyl-tRNA synthetase rbh
Displaying items 1-30 of 51 in total

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