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S13_scaffold_482_curated

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_482_curated_1
unknown

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1..96
DNA (96bp) protein (32aa)

This feature has no annotations

S13_scaffold_482_curated_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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350..1180
DNA (831bp) protein (277aa)
ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSC8_9RHIZ rbh
ABC transporter {ECO:0000313|EMBL:EHK56338.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ATPase component of Mn/Zn ABC-type transporter rbh
S13_scaffold_482_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1180..2055
DNA (876bp) protein (292aa)
ABC transporter, permease protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSC9_9RHIZ rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EHK56339.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter rbh
S13_scaffold_482_curated_4
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2091..3134
DNA (1044bp) protein (348aa)
UPI0003D03543 related cluster n=1 Tax=unknown RepID=UPI0003D03543 rbh
Metal ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESZ21256.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
Putative ABC transporter (substrate-binding protein) rbh
S13_scaffold_482_curated_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3157..4029)
DNA (873bp) protein (291aa)
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI000378C970 rbh
regulator protein PecM rbh
Regulator protein PecM {ECO:0000313|EMBL:AGB72807.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
S13_scaffold_482_curated_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4110..4592
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003624188
Transcriptional regulator protein {ECO:0000313|EMBL:EKE73771.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
pecS; transcriptional regulator protein
S13_scaffold_482_curated_7
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4633..6195)
DNA (1563bp) protein (521aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
UPI0003CEC2D7 related cluster n=1 Tax=unknown RepID=UPI0003CEC2D7 rbh
GMP synthase large subunit rbh
S13_scaffold_482_curated_8
Halomonas salina, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6281..6934)
DNA (654bp) protein (218aa)
5'-methylthioadenosine nucleosidase {ECO:0000313|EMBL:KGE78870.1}; EC=3.2.2.9 {ECO:0000313|EMBL:KGE78870.1};; TaxID=42565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas salina.;"
S-adenosylhomocysteine nucleosidase n=1 Tax=Halomonas sp. KM-1 RepID=UPI00028931AA rbh
5''-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative rbh
S13_scaffold_482_curated_9
Mesorhizobium sp. LSJC285A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6931..7389)
DNA (459bp) protein (153aa)
UPI0003CE2266 related cluster n=1 Tax=unknown RepID=UPI0003CE2266
Phenylacetic acid degradation protein {ECO:0000313|EMBL:ESW90292.1}; TaxID=1287338 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC285A00.;"
hypothetical protein
S13_scaffold_482_curated_10
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7469..7918)
DNA (450bp) protein (150aa)
UPI0003CFAD8E related cluster n=1 Tax=unknown RepID=UPI0003CFAD8E
CrtK/TspO family sensor protein {ECO:0000313|EMBL:ESZ62877.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
tryptophan-rich sensory protein
S13_scaffold_482_curated_11
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8006..8707)
DNA (702bp) protein (234aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3W9I7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO86756.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
cyclic nucleotide-binding domain protein
S13_scaffold_482_curated_12
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8725..10017)
DNA (1293bp) protein (431aa)
MFS transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI000361388E rbh
Fmu (Sun) domain-containing protein rbh
Fmu (Sun) domain protein {ECO:0000313|EMBL:ADV11686.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S13_scaffold_482_curated_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10179..12374)
DNA (2196bp) protein (732aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Catalase-peroxidase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXZ5_9RHIZ rbh
catalase/peroxidase HPI rbh
S13_scaffold_482_curated_14
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12560..13489
DNA (930bp) protein (310aa)
LysR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FSW9_9RHIZ rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ESX82797.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
transcriptional regulator rbh
S13_scaffold_482_curated_15
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13472..13891)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BVA9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM73511.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
S13_scaffold_482_curated_16
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14187..15065)
DNA (879bp) protein (293aa)
IS1 transposase n=3 Tax=Mesorhizobium RepID=E8TJN7_MESCW rbh
IS1 transposase rbh
IS1 transposase {ECO:0000313|EMBL:AEH90785.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
S13_scaffold_482_curated_17
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15173..16303
DNA (1131bp) protein (377aa)
Plasmid maintenance system antidote protein, XRE family n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JB05_BURVG rbh
higA; addiction module antidote protein, HigA family
Putative Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:CDW92878.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
S13_scaffold_482_curated_18
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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16324..16797
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7M0_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS85469.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
S13_scaffold_482_curated_19
Acetobacter aceti, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16794..16994)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Acetobacter aceti RepID=UPI000226013B
Uncharacterized protein {ECO:0000313|EMBL:GAN57842.1}; TaxID=887700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter subgen. Acetobacter.;" source="Acetobacter aceti NBRC 14818.;"
S13_scaffold_482_curated_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17406..17978
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002DEC6CB
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57318.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S13_scaffold_482_curated_21
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18056..19198)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036E068E rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX57733.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein rbh
S13_scaffold_482_curated_22
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19219..20721)
DNA (1503bp) protein (501aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205) rbh
Inosine-5`-monophosphate dehydrogenase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H4H6_9RHIZ rbh
S13_scaffold_482_curated_23
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20960..22111
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000368BB30 rbh
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CDH84627.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
S13_scaffold_482_curated_24
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22101..23180
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003807FFD rbh
Peptidase M48 family protein
Peptidase M48 family protein {ECO:0000313|EMBL:CDN52687.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Displaying 24 items

View Taxonomy