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S13_scaffold_340_curated

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_340_curated_1
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(696..1355)
DNA (660bp) protein (220aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ60_9BURK rbh
HTH-type transcriptional repressor KstR2 {ECO:0000313|EMBL:EWS63448.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
TetR family transcriptional regulator
S13_scaffold_340_curated_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1494..2687)
DNA (1194bp) protein (398aa)
Acyl-CoA dehydrogenase-like protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ61_9BURK rbh
acyl-CoA dehydrogenase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_340_curated_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2726..4507)
DNA (1782bp) protein (594aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ62_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL22236.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein rbh
S13_scaffold_340_curated_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4538..5029)
DNA (492bp) protein (164aa)
Thioesterase family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ63_9BURK rbh
Thioesterase family protein {ECO:0000313|EMBL:EHL22237.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
S13_scaffold_340_curated_5
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5068..6708)
DNA (1641bp) protein (547aa)
Beta-lactamase domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ64_9BURK rbh
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EHL22238.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
beta-lactamase domain-containing protein
S13_scaffold_340_curated_6
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6740..8170)
DNA (1431bp) protein (477aa)
VWA containing CoxE family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ65_9BURK rbh
VWA containing CoxE family protein {ECO:0000313|EMBL:EHL22239.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
VWA containing CoxE family protein rbh
S13_scaffold_340_curated_7
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8154..9122)
DNA (969bp) protein (323aa)
AAA_5 ATPase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ66_9BURK rbh
Gas vesicle protein GvpN {ECO:0000313|EMBL:EWS63569.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
hypothetical protein rbh
S13_scaffold_340_curated_8
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9094..10254)
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ67_9BURK rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHL22241.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
acyl-CoA dehydrogenase domain-containing protein
S13_scaffold_340_curated_9
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10268..11431)
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ68_9BURK rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHL22242.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
acyl-CoA dehydrogenase
S13_scaffold_340_curated_10
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11487..13445)
DNA (1959bp) protein (653aa)
Acetyl-CoA carboxylase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ69_9BURK rbh
Acetyl-CoA carboxylase {ECO:0000313|EMBL:EHL22243.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
putative 3-methylcrotonyl-CoA carboxylase alpha subunit rbh
S13_scaffold_340_curated_11
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13578..15197)
DNA (1620bp) protein (540aa)
Propionyl-CoA carboxylase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ70_9BURK rbh
propionyl-CoA carboxylase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
S13_scaffold_340_curated_12
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15273..17405)
DNA (2133bp) protein (711aa)
Fatty oxidation complex subunit alpha n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ71_9BURK rbh
Fatty oxidation complex subunit alpha {ECO:0000313|EMBL:EHL22245.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
enoyl-CoA hydratase/isomerase family protein
S13_scaffold_340_curated_13
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17451..18659)
DNA (1209bp) protein (403aa)
Acetyl-CoA acetyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ72_9BURK rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EHL22246.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
acetyl-CoA C-acetyltransferase family protein
S13_scaffold_340_curated_14
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18730..19866)
DNA (1137bp) protein (379aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ73_9BURK rbh
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EHL22247.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
putative acyl-CoA dehydrogenase rbh
S13_scaffold_340_curated_15
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20018..20707
DNA (690bp) protein (230aa)
Regulatory protein TetR n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ74_9BURK rbh
Regulatory protein TetR {ECO:0000313|EMBL:EHL22248.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
TetR family transcriptional regulator
S13_scaffold_340_curated_16
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20732..22345
DNA (1614bp) protein (538aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EWS65200.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EWS65200.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
o-succinylbenzoate--CoA ligase (EC:6.2.1.26) rbh
O-succinylbenzoate--CoA ligase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ75_9BURK rbh
S13_scaffold_340_curated_17
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22425..23174
DNA (750bp) protein (250aa)
Electron transfer flavoprotein subunit alpha/beta n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ76_9BURK rbh
Electron transfer flavoprotein subunit alpha/beta {ECO:0000313|EMBL:EHL22250.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
electron transfer flavoprotein subunit alpha/beta rbh
S13_scaffold_340_curated_18
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23174..24112
DNA (939bp) protein (313aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ77_9BURK rbh
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:EHL22251.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
electron transfer flavoprotein subunit alpha rbh
S13_scaffold_340_curated_19
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24212..25804
DNA (1593bp) protein (531aa)
AMP-dependent synthetase and ligase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ78_9BURK rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EHL22252.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
AMP-dependent synthetase and ligase rbh
S13_scaffold_340_curated_20
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26013..26801
DNA (789bp) protein (263aa)
4-chlorobenzoyl coenzyme A dehalogenase-2 {ECO:0000313|EMBL:EWS65453.1}; EC=3.8.1.7 {ECO:0000313|EMBL:EWS65453.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ79_9BURK rbh
enoyl-CoA hydratase
S13_scaffold_340_curated_21
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26816..28039
DNA (1224bp) protein (408aa)
Formyl-CoA transferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ80_9BURK rbh
Formyl-CoA transferase {ECO:0000313|EMBL:EHL22254.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
S13_scaffold_340_curated_22
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28036..30018
DNA (1983bp) protein (661aa)
Acetoacetyl-CoA synthetase {ECO:0000313|EMBL:EHL22255.1}; EC=6.2.1.16 {ECO:0000313|EMBL:EHL22255.1};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
Acetoacetyl-CoA synthetase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ81_9BURK rbh
acetoacetyl-CoA synthetase
S13_scaffold_340_curated_23
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30053..30838
DNA (786bp) protein (262aa)
menB; 1,4-Dihydroxy-2-naphthoyl-CoA synthase (EC:4.1.3.36)
Naphthoate synthase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ82_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
S13_scaffold_340_curated_24
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30893..32047
DNA (1155bp) protein (385aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EWS64622.1}; EC=1.3.99.- {ECO:0000313|EMBL:EWS64622.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
AcyL-CoA dehydrogenase domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ83_9BURK rbh
hypothetical protein
S13_scaffold_340_curated_25
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32059..33237
DNA (1179bp) protein (393aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ84_9BURK rbh
coA-transferase III family protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
S13_scaffold_340_curated_26
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33254..34624
DNA (1371bp) protein (457aa)
MmgE/PrpD family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ85_9BURK rbh
mmgE/PrpD family protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
S13_scaffold_340_curated_27
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34621..35460
DNA (840bp) protein (280aa)
HpcH/HpaI aldolase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ86_9BURK rbh
hpcH/HpaI aldolase/citrate lyase family protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
S13_scaffold_340_curated_28
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35495..36283
DNA (789bp) protein (263aa)
Citrate synthase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ87_9BURK rbh
Citrate synthase {ECO:0000313|EMBL:EHL22261.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
citrate synthase family protein
S13_scaffold_340_curated_29
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36369..37415
DNA (1047bp) protein (349aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
biotin synthase (EC:2.8.1.6) rbh
Biotin synthase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ88_9BURK rbh
S13_scaffold_340_curated_30
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37465..37689
DNA (225bp) protein (75aa)
aspartate 1-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11] id=5081267 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
aspartate 1-decarboxylase (EC:4.1.1.11)
Tax=BJP_08E140C01_Burkholderiales_65_30
Displaying 30 items

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