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S15_scaffold_392_curated

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_392_curated_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1022
DNA (1020bp) protein (340aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Afipia birgiae RepID=UPI00037BC94E
S15_scaffold_392_curated_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1214..2338
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000315EE99 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38977.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
LuxR family regulatory protein rbh
S15_scaffold_392_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2876..4930
DNA (2055bp) protein (685aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCQ2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38519.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
amine oxidase rbh
S15_scaffold_392_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5006..6961
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJF6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38518.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter rbh
S15_scaffold_392_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6977..8143)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7E5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38517.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
monooxygenase protein rbh
S15_scaffold_392_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8405..9535
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAE2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38516.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
S15_scaffold_392_curated_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10259..10630
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=5 Tax=Bradyrhizobiaceae RepID=F7QQ01_9BRAD
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
rpsL; 30S ribosomal protein S12
S15_scaffold_392_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10646..11116
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCP6_9BRAD rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rpsG; 30S ribosomal protein S7
S15_scaffold_392_curated_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11150..13222
DNA (2073bp) protein (691aa)
Elongation factor G n=2 Tax=Bradyrhizobiaceae RepID=F7QPZ9_9BRAD rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
fusA; elongation factor G
S15_scaffold_392_curated_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13260..14450
DNA (1191bp) protein (397aa)
tuf; elongation factor Tu (EC:3.6.5.3) rbh
Elongation factor Tu n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=EFTU_RHOPB rbh
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
S15_scaffold_392_curated_11
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14560..14868
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=27 Tax=Bradyrhizobiaceae RepID=RS10_BRADU
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
S15_scaffold_392_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14967..15692
DNA (726bp) protein (242aa)
50S ribosomal protein L3 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG11_9BRAD rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rplC; 50S ribosomal protein L3 rbh
S15_scaffold_392_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15692..16312
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCP0_9BRAD rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rplD; 50S ribosomal protein L4 rbh
S15_scaffold_392_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16309..16608
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=1 Tax=Afipia birgiae RepID=UPI0002D55572
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rplW; 50S ribosomal protein L23
S15_scaffold_392_curated_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16620..17456
DNA (837bp) protein (279aa)
50S ribosomal protein L2 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7D3_9BRAD rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rplB; 50S ribosomal protein L2 rbh
S15_scaffold_392_curated_16
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17469..17744
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=5 Tax=Bradyrhizobiaceae RepID=H5YM76_9BRAD
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
rpsS; 30S ribosomal protein S19
S15_scaffold_392_curated_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17763..18149
DNA (387bp) protein (129aa)
50S ribosomal protein L22 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG06_9BRAD
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rplV; 50S ribosomal protein L22
S15_scaffold_392_curated_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18165..18866
DNA (702bp) protein (234aa)
30S ribosomal protein S3 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCN5_9BRAD rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rpsC; 30S ribosomal protein S3 rbh
S15_scaffold_392_curated_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18901..19314
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Afipia birgiae RepID=UPI0002F6B4FB
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rplP; 50S ribosomal protein L16
S15_scaffold_392_curated_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19325..19540
DNA (216bp) protein (72aa)
50S ribosomal protein L29 n=1 Tax=Afipia birgiae RepID=UPI0002E310FF
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rpmC; 50S ribosomal protein L29
S15_scaffold_392_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19551..19796
DNA (246bp) protein (82aa)
30S ribosomal protein S17 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAC8_9BRAD
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rpsQ; 30S ribosomal protein S17
S15_scaffold_392_curated_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19835..20203
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=4 Tax=Bradyrhizobiaceae RepID=RL14_NITHX
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
S15_scaffold_392_curated_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20203..20517
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCN0_9BRAD
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rplX; 50S ribosomal protein L24
S15_scaffold_392_curated_24
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20510..21067
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=1 Tax=Afipia birgiae RepID=UPI0002DA398D rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
rplE; 50S ribosomal protein L5 rbh
S15_scaffold_392_curated_25
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21120..21425
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Afipia birgiae RepID=UPI0002FC8F5B
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
rpsN; 30S ribosomal protein S14
S15_scaffold_392_curated_26
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21438..21836
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=2 Tax=Bradyrhizobiaceae RepID=F7QPY2_9BRAD
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
rpsH; 30S ribosomal protein S8
S15_scaffold_392_curated_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21850..22383
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFZ6_9BRAD rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rplF; 50S ribosomal protein L6 rbh
S15_scaffold_392_curated_28
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22395..22757
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Afipia birgiae RepID=UPI00031CF0C5
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rplR; 50S ribosomal protein L18
S15_scaffold_392_curated_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22830..23408
DNA (579bp) protein (193aa)
30S ribosomal protein S5 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJD7_9BRAD rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rpsE; 30S ribosomal protein S5 rbh
S15_scaffold_392_curated_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23491..23688
DNA (198bp) protein (66aa)
50S ribosomal protein L30 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7B4_9BRAD
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rpmD; 50S ribosomal protein L30
Displaying items 1-30 of 44 in total

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