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S15_scaffold_1035_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_1035_curated_1
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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236..574
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00036684D1
Uncharacterized protein {ECO:0000313|EMBL:KJK20845.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
conserved membrane protein of unknown function
S15_scaffold_1035_curated_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1015..1593)
DNA (579bp) protein (193aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3C3_9BRAD rbh
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
S15_scaffold_1035_curated_3
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1590..3113)
DNA (1524bp) protein (508aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-) rbh
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Afipia birgiae RepID=UPI00035D7C0F rbh
UbiD family decarboxylase {ECO:0000313|EMBL:EFI52452.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
S15_scaffold_1035_curated_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3758..4312
DNA (555bp) protein (185aa)
sterol-binding protein n=1 Tax=Afipia birgiae RepID=UPI000367E097 rbh
Sterol-binding domain protein {ECO:0000313|EMBL:EFI52451.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
S15_scaffold_1035_curated_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4303..5280
DNA (978bp) protein (326aa)
protease n=1 Tax=Afipia birgiae RepID=UPI0002F82EEA rbh
peptidase U32 rbh
Peptidase U32 {ECO:0000313|EMBL:AEI07613.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
S15_scaffold_1035_curated_6
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5330..6247
DNA (918bp) protein (306aa)
protease n=1 Tax=Afipia birgiae RepID=UPI00036CDC29 rbh
Peptidase U32 {ECO:0000313|EMBL:EFI52449.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
peptidase U32 rbh
S15_scaffold_1035_curated_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6309..6707
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030E0A2C
Uncharacterized protein {ECO:0000313|EMBL:CEG07056.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
S15_scaffold_1035_curated_8
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7156..7878
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036C28CE rbh
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EFI52436.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
CarD family transcriptional regulator rbh
S15_scaffold_1035_curated_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8072..8488
DNA (417bp) protein (139aa)
Rrf2 family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI00037E58B2
DNA-binding transcriptional regulator {ECO:0000313|EMBL:CDX53611.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
nsrR; HTH-type transcriptional regulator
S15_scaffold_1035_curated_10
unknown

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8681..8884
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying 10 items

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