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S15_scaffold_63_curated

Search features with annotation key words

Displaying items 1-30 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_63_curated_1
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(1..5679)
DNA (5679bp) protein (1893aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYM2_9BACT rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
S15_scaffold_63_curated_2
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6046..7305)
DNA (1260bp) protein (420aa)
Na(+)-translocating NADH-quinone reductase subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; Short=Na(+)-NQR subunit F {ECO:0000256|HAMAP-Rule:MF_00430};; Short=Na(+)-translocating NQR subunit F {ECO:0000256|HAMAP-Rule:MF_00430};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00430};; NQR complex subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; NQR-1 subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
Na(+)-translocating NADH-quinone reductase subunit F n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CEY8_9PORP rbh
nqrF; Na(+)-translocating NADH-quinone reductase subunit F rbh
S15_scaffold_63_curated_3
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7330..7947)
DNA (618bp) protein (206aa)
NADH:ubiquinone oxidoreductase, subunit E n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZU84_9BACE rbh
Na(+)-translocating NADH-quinone reductase subunit E rbh
Tax=CG_Paludi_01
S15_scaffold_63_curated_4
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7953..8585)
DNA (633bp) protein (211aa)
Na+-translocating NADH-quinone reductase subunit D n=1 Tax=Bacteroides sp. CAG:462 RepID=R7CYX7_9BACE rbh
Na(+)-translocating NADH-quinone reductase subunit D rbh
Tax=CG_Paludi_01
S15_scaffold_63_curated_5
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8582..9304)
DNA (723bp) protein (241aa)
NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit n=2 Tax=Bacteroides RepID=I8XG02_9BACE
nqrC; putative Na+-translocating NADH-quinone reductase subunit C
Tax=CG_Paludi_01
S15_scaffold_63_curated_6
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9322..10524)
DNA (1203bp) protein (401aa)
Na+-translocating NADH-quinone reductase subunit B n=14 Tax=Bacteroides RepID=A6L5A0_BACV8 rbh
Na(+)-translocating NADH-quinone reductase subunit B
Tax=CG_Paludi_01
S15_scaffold_63_curated_7
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10526..11902)
DNA (1377bp) protein (459aa)
Na(+)-translocating NADH-quinone reductase subunit A n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN89_9BACE rbh
nqrA; putative Na+-translocating NADH-quinone reductase subunit A
Tax=CG_Paludi_01
S15_scaffold_63_curated_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12162..13481
DNA (1320bp) protein (440aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T116_PALPW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADQ78397.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S15_scaffold_63_curated_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13482..14426
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2G7_PALPW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADQ78911.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S15_scaffold_63_curated_10
unknown

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comp(14472..14672)
DNA (201bp) protein (67aa)

This feature has no annotations

S15_scaffold_63_curated_trna_1
unknown

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14477..14550
DNA (74bp)
transferRNA Arg
S15_scaffold_63_curated_11
unknown

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comp(14626..15396)
DNA (771bp) protein (257aa)

This feature has no annotations

S15_scaffold_63_curated_12
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(15465..16049)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RDE5_CELLC
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
S15_scaffold_63_curated_13
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16321..18300
DNA (1980bp) protein (660aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8Z5J9_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EIY70725.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
spore coat protein CotH
S15_scaffold_63_curated_14
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(18305..19321)
DNA (1017bp) protein (339aa)
Oxidoreductase, zinc-binding dehydrogenase family id=4421322 bin=GWF2_Lentisphaerae_50_93 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S rbh
sorbitol dehydrogenase
Tax=GWF2_Lentisphaerae_50_93_curated
S15_scaffold_63_curated_15
Paenibacillus curdlanolyticus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(19509..20354)
DNA (846bp) protein (282aa)
amidohydrolase 2; K07046 id=12554612 bin=CNBR_ACIDO species=Paenibacillus curdlanolyticus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
Amidohydrolase 2 {ECO:0000313|EMBL:EFM09971.1}; TaxID=717606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus curdlanolyticus YK9.;"
amidohydrolase 2 rbh
S15_scaffold_63_curated_16
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(20347..21387)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AD81D rbh
oxidoreductase, aryl-alcohol dehydrogenase like protein rbh
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
S15_scaffold_63_curated_17
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21453..22439)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T472_PALPW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADQ79516.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S15_scaffold_63_curated_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22515..24152
DNA (1638bp) protein (546aa)
glycogen(starch) synthase (EC:2.4.1.11) rbh
Glycogen(Starch) synthase {ECO:0000313|EMBL:ADQ78312.1}; EC=2.4.1.11 {ECO:0000313|EMBL:ADQ78312.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Glycogen(Starch) synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0F3_PALPW rbh
S15_scaffold_63_curated_19
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24276..26837
DNA (2562bp) protein (854aa)
Alpha-glucan phosphorylase {ECO:0000313|EMBL:ADQ78313.1}; EC=2.4.1.1 {ECO:0000313|EMBL:ADQ78313.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
alpha-glucan phosphorylase (EC:2.4.1.1) rbh
Alpha-glucan phosphorylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0F4_PALPW rbh
S15_scaffold_63_curated_20
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26854..27984)
DNA (1131bp) protein (377aa)
tRNA-guanine transglycosylase (EC:2.4.2.29) rbh
Queuine tRNA-ribosyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T401_PALPW rbh
Tax=CG_Paludi_01
S15_scaffold_63_curated_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28004..28594)
DNA (591bp) protein (197aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAV3_CHIPD
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
S15_scaffold_63_curated_22
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28594..28944)
DNA (351bp) protein (117aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=2 Tax=Tannerella RepID=G9S0L5_9PORP
S15_scaffold_63_curated_23
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28935..29780)
DNA (846bp) protein (282aa)
pantothenate synthetase (EC:6.3.2.1) rbh
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Pantothenate synthetase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T404_PALPW rbh
S15_scaffold_63_curated_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29931..30743
DNA (813bp) protein (271aa)
glycogen synthase (EC:2.4.1.21) rbh
Glycogen synthase (UDP-glucose) {ECO:0000313|EMBL:ADQ79449.1}; EC=2.4.1.21 {ECO:0000313|EMBL:ADQ79449.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Glycogen synthase (UDP-glucose) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T405_PALPW rbh
S15_scaffold_63_curated_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30757..32142
DNA (1386bp) protein (462aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T406_PALPW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADQ79450.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S15_scaffold_63_curated_26
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


32265..34499
DNA (2235bp) protein (745aa)
SSU ribosomal protein S1P n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T141_PALPW rbh
30S ribosomal protein s1 rbh
Tax=CG_Paludi_01
S15_scaffold_63_curated_27
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(34553..35140)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382C784 rbh
acetyltransferase (GNAT) family protein
Tax=GWF2_Bacteroidetes_41_31_curated
S15_scaffold_63_curated_28
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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35257..36507
DNA (1251bp) protein (417aa)
Beta-lactamase id=1745533 bin=GWE2_Bacteroidetes_42_39 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + rbh
beta-lactamase family protein
Tax=GWE2_Bacteroidetes_42_39_curated
S15_scaffold_63_curated_29
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36491..37660)
DNA (1170bp) protein (390aa)
Glycosyl transferase group 1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N9_PALPW rbh
group 1 glycosyl transferase rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADQ79683.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 1-30 of 178 in total

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