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S15_scaffold_1475_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_1475_curated_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(2..1081)
DNA (1080bp) protein (360aa)
malic protein NAD-binding protein (EC:1.1.1.40) rbh
Malate dehydrogenase id=4717577 bin=GWC2_Chloroflexi_73_18 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
Tax=RBG_16_Acidobacteria_70_10_curated
S15_scaffold_1475_curated_2
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(1246..2280)
DNA (1035bp) protein (345aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1) rbh
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P592_9BACT rbh
S15_scaffold_1475_curated_3
Guillardia theta, Guillardia, Pyrenomonadales, Cryptophyta, Eukaryota

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2372..3064
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Guillardia theta CCMP2712 RepID=L1IEH2_GUITH
Uncharacterized protein {ECO:0000313|EMBL:EKX34274.1, ECO:0000313|EnsemblProtists:EKX34274}; TaxID=905079 species="Eukaryota; Cryptophyta; Pyrenomonadales; Geminigeraceae; Guillardia.;" source="Guillardia theta CCMP2712.;"
hypothetical protein
S15_scaffold_1475_curated_4
unknown

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3130..3600
DNA (471bp) protein (157aa)

This feature has no annotations

S15_scaffold_1475_curated_5
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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3634..4203
DNA (570bp) protein (190aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase I n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P591_9BACT
S15_scaffold_1475_curated_6
unknown

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comp(4095..4829)
DNA (735bp) protein (245aa)

This feature has no annotations

S15_scaffold_1475_curated_7
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

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4884..5303
DNA (420bp) protein (140aa)
Uncharacterized protein id=12554820 bin=CNBR_ACIDO species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=GWC2_Elusimicrobia_64_44_curated
S15_scaffold_1475_curated_8
unknown

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5312..5629
DNA (318bp) protein (106aa)

This feature has no annotations

S15_scaffold_1475_curated_9
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5630..5785)
DNA (156bp) protein (52aa)
Transcriptional regulator, ArsR family n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQ49_STIAD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADO68159.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
Displaying 9 items

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