ggKbase home page

S15_scaffold_1102_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_1102_curated_1
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..432
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NYH5_9BACT
trans-aconitate methyltransferase
Trans-aconitate methyltransferase {ECO:0000313|EMBL:AJE16886.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
S15_scaffold_1102_curated_2
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(433..1425)
DNA (993bp) protein (331aa)
homospermidine synthase (EC:2.5.1.45) rbh
Homospermidine synthase (Spermidine-specific) n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWZ5_9BACT rbh
Deoxyhypusine synthase {ECO:0000313|EMBL:AIE18164.1}; TaxID=159290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfonatronum thiodismutans.;"
S15_scaffold_1102_curated_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1529..2395
DNA (867bp) protein (289aa)
Flagellar motor protein MotA n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1C1_9BACT rbh
Flagellar motor stator protein MotA {ECO:0000313|EMBL:CDM65634.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cheY; chemotaxis signal transduction protein CheY
S15_scaffold_1102_curated_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

2402..3310
DNA (909bp) protein (303aa)
OmpA/MotB domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1C0_9BACT rbh
outer membrane protein, OmpA/MotB family
Outer membrane protein, OmpA/MotB family {ECO:0000313|EMBL:CBE68823.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S15_scaffold_1102_curated_5
GWA2_Deltaproteobacteria_55_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3497..4183)
DNA (687bp) protein (229aa)
Uncharacterized protein id=2882678 bin=GWF2_OP3_43_52 species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
Tax=GWA2_Deltaproteobacteria_55_10_curated
S15_scaffold_1102_curated_6
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4183..4542)
DNA (360bp) protein (120aa)
Mannose-6-phosphate isomerase, type 2 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWL3_9BACT
mannose-1-phosphate guanylyltransferase
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:ACZ85220.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
S15_scaffold_1102_curated_7
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4569..5729)
DNA (1161bp) protein (387aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22) rbh
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:ABC77001.1}; EC=2.7.7.22 {ECO:0000313|EMBL:ABC77001.1};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Mannose-1-phosphate guanylyltransferase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWL2_9BACT rbh
S15_scaffold_1102_curated_8
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5733..7946
DNA (2214bp) protein (738aa)
PAS domain S-box id=4895387 bin=GWC2_Ignavibacteria_56_12 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
PAS/PAC domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
S15_scaffold_1102_curated_9
unknown

Not on your lists

comp(7953..8150)
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 9 items

View Taxonomy