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S15_scaffold_814_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_814_curated_1
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..696)
DNA (696bp) protein (232aa)
Tetratricopeptide repeat protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXS7_9BACT
Chemotaxis protein CheY {ECO:0000313|EMBL:AKF82304.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
response regulator
S15_scaffold_814_curated_2
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

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896..2524
DNA (1629bp) protein (543aa)
Serine/threonine-protein kinase-like domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZG2_9BACT rbh
protein kinase
Tax=GWF2_Elusimicrobia_62_30_curated
S15_scaffold_814_curated_3
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2527..3234
DNA (708bp) protein (236aa)
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Ribonuclease 3 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXS6_9BACT
S15_scaffold_814_curated_4
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3238..3996
DNA (759bp) protein (253aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
Histidine biosynthesis protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXS5_9BACT
S15_scaffold_814_curated_5
unknown

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4008..5792
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXS4_9BACT rbh
S15_scaffold_814_curated_6
unknown

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5835..6857
DNA (1023bp) protein (341aa)

This feature has no annotations

S15_scaffold_814_curated_7
unknown

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7244..7450
DNA (207bp) protein (69aa)

This feature has no annotations

S15_scaffold_814_curated_8
unknown

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7447..8133
DNA (687bp) protein (229aa)

This feature has no annotations

S15_scaffold_814_curated_9
unknown

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8130..8942
DNA (813bp) protein (271aa)

This feature has no annotations

S15_scaffold_814_curated_10
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8966..10771
DNA (1806bp) protein (602aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000255|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01703};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
ABC transporter related protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXS3_9BACT rbh
phospholipid-lipopolysaccharide ABC transporter rbh
S15_scaffold_814_curated_11
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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10773..11822
DNA (1050bp) protein (350aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXS2_9BACT rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase rbh
Displaying 11 items

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