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S15_scaffold_41_curated

Search features with annotation key words

Displaying items 1-30 of 238 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_41_curated_1
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(176..3745)
DNA (3570bp) protein (1190aa)
Two-component system sensor n=2 Tax=Pseudomonas aeruginosa RepID=U9ERY3_PSEAI
Two-component sensor {ECO:0000313|EMBL:BAQ74041.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
two-component sensor
S15_scaffold_41_curated_2
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3922..5121)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U6ZZI3_9PSED
Two-component response regulator RocR {ECO:0000313|EMBL:BAQ74042.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
diguanylate phosphodiesterase
S15_scaffold_41_curated_3
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5343..5972
DNA (630bp) protein (210aa)
LuxR family transcriptional regulator n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U6ZZ09_9PSED
Two-component response regulator {ECO:0000313|EMBL:BAQ80342.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
LuxR family transcriptional regulator
S15_scaffold_41_curated_4
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6166..6918
DNA (753bp) protein (251aa)
Putative fimbrial chaperone YfcS n=1 Tax=Serratia plymuthica 4Rx13 RepID=S0AJZ3_SERPL
MrfD {ECO:0000313|EMBL:BAQ74044.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
yfcS; putative fimbrial chaperone YfcS
S15_scaffold_41_curated_5
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6915..7412
DNA (498bp) protein (166aa)
Fimbrial protein n=1 Tax=Serratia odorifera DSM 4582 RepID=D4DZU4_SEROD
Fimbrial protein MrfE {ECO:0000313|EMBL:BAQ74045.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
putative fimbrial protein
S15_scaffold_41_curated_6
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7420..8502
DNA (1083bp) protein (361aa)
Uncharacterized protein {ECO:0000313|EMBL:BAQ80345.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
S15_scaffold_41_curated_7
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8808..9371
DNA (564bp) protein (188aa)
Fimbria A protein n=1 Tax=Serratia marcescens RepID=FMA_SERMA
Fimbrial protein {ECO:0000313|EMBL:BAQ74047.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
P pilus assembly protein, pilin MrfA
S15_scaffold_41_curated_8
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9715..12171
DNA (2457bp) protein (819aa)
Fimbrial outer membrane usher protein n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V5ZW53_SERMA rbh
Fimbrial biogenesis outer membrane usher protein {ECO:0000313|EMBL:BAQ80347.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
fimbrial biogenesis outer membrane usher protein MrfC
S15_scaffold_41_curated_9
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12187..12942
DNA (756bp) protein (252aa)
Pili assembly chaperone n=1 Tax=Achromobacter piechaudii HLE RepID=J4YE11_9BURK rbh
Pili assembly chaperone {ECO:0000313|EMBL:BAQ80348.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
fimbrial chaperone MrfD
S15_scaffold_41_curated_10
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12932..13597
DNA (666bp) protein (222aa)
Fimbrial subunit n=1 Tax=Achromobacter piechaudii HLE RepID=J4QQP5_9BURK
Fimbrial subunit {ECO:0000313|EMBL:BAQ74050.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
fimbrial-like adhesin protein MrfF
S15_scaffold_41_curated_11
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13606..14148
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Serratia plymuthica 4Rx13 RepID=S0ANB3_SERPL
Uncharacterized protein {ECO:0000313|EMBL:BAQ80350.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
hypothetical protein
S15_scaffold_41_curated_12
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14262..15026)
DNA (765bp) protein (255aa)
Amino acid ABC transporter, ATP-binding protein n=2 Tax=Pseudomonas fluorescens group RepID=Q4KE69_PSEF5 rbh
ABC transporter {ECO:0000313|EMBL:BAQ80351.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
amino acid ABC transporter ATP-binding protein rbh
S15_scaffold_41_curated_13
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15023..15682)
DNA (660bp) protein (220aa)
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KE68_PSEF5 rbh
His/Glu/Gln/Arg/opine family amino acid ABC transporter permease rbh
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:AAY91631.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_41_curated_14
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15692..16339)
DNA (648bp) protein (216aa)
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KE67_PSEF5 rbh
His/Glu/Gln/Arg/opine family amino acid ABC transporter permease rbh
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:AAY91632.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_41_curated_15
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16403..17191)
DNA (789bp) protein (263aa)
Amino acid ABC transporter, periplasmic amino acid-binding protein n=2 Tax=Pseudomonas protegens RepID=Q4KE66_PSEF5 rbh
amino acid ABC transporter substrate-binding protein rbh
Amino acid ABC transporter, periplasmic amino acid-binding protein {ECO:0000313|EMBL:AAY91633.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_41_curated_16
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17382..20429)
DNA (3048bp) protein (1016aa)
dgdA2; 2,2-dialkylglycine decarboxylase DgdA (EC:4.1.1.64) rbh
2,2-dialkylglycine decarboxylase DgdA n=1 Tax=Pseudomonas protegens CHA0 RepID=R4REP8_9PSED rbh
Alanine--glyoxylate aminotransferase 2-like 1 {ECO:0000313|EMBL:BAQ80355.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
S15_scaffold_41_curated_17
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20569..21009
DNA (441bp) protein (147aa)
Transcriptional regulator, AsnC family n=2 Tax=Pseudomonas protegens RepID=Q4KE64_PSEF5
AsnC family transcriptional regulator {ECO:0000313|EMBL:BAQ74057.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
AsnC family transcriptional regulator
S15_scaffold_41_curated_18
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21219..21725
DNA (507bp) protein (169aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Pseudomonas protegens RepID=Q4KE63_PSEF5 rbh
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AAY91636.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_41_curated_19
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21722..22690
DNA (969bp) protein (323aa)
iron dicitrate transport regulator FecR n=1 Tax=Pseudomonas fluorescens RepID=UPI0002EA165E rbh
FecR/PupR family sigma factor regulatory protein {ECO:0000313|EMBL:BAQ80358.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
fecR5; protein FecR rbh
S15_scaffold_41_curated_20
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22788..25622
DNA (2835bp) protein (945aa)
TonB-dependent outermembrane heme receptor n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KE61_PSEF5 rbh
TonB-dependent outermembrane heme receptor {ECO:0000313|EMBL:BAQ80359.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
TonB-dependent outermembrane heme receptor rbh
S15_scaffold_41_curated_21
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25726..26481)
DNA (756bp) protein (252aa)
Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C n=1 Tax=Fusarium oxysporum f. sp. cubense (strain race 4) RepID=N1RLD5_FUSC4
Uncharacterized protein {ECO:0000313|EMBL:BAQ80360.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
S15_scaffold_41_curated_22
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26823..27242)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI000365229B
Uncharacterized protein {ECO:0000313|EMBL:EQM68622.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
hypothetical protein
S15_scaffold_41_curated_23
unknown

Not on your lists

comp(27442..27723)
DNA (282bp) protein (94aa)

This feature has no annotations

S15_scaffold_41_curated_24
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28567..29046)
DNA (480bp) protein (160aa)
GCN5-like N-acetyltransferase n=1 Tax=Pseudomonas protegens CHA0 RepID=R4REQ6_9PSED
Acetyltransferase {ECO:0000313|EMBL:BAQ74062.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
GCN5-like N-acetyltransferase
S15_scaffold_41_curated_25
Pseudomonas brassicacearum, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29104..29625
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Pseudomonas syringae pv. actinidiae ICMP 19095 RepID=S6TX29_PSESF
putative tRNA-m1A22 methylase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AHL34493.1}; TaxID=930166 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas brassicacearum.;"
S15_scaffold_41_curated_26
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29637..30101
DNA (465bp) protein (155aa)
hypothetical protein n=2 Tax=Pseudomonas syringae RepID=UPI0002F3D505
Uncharacterized protein {ECO:0000313|EMBL:BAQ74061.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein
S15_scaffold_41_curated_27
Pseudomonas sp. CF161, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30267..30428
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF161 RepID=S6JAW4_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EPL14446.1}; TaxID=911241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF161.;"
hypothetical protein
S15_scaffold_41_curated_28
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30621..30827)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KE58_PSEF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY91641.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_41_curated_29
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30928..31188)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KE57_PSEF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY91642.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_41_curated_30
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31458..32129
DNA (672bp) protein (224aa)
Putative SAM-dependent methyltransferase n=1 Tax=Pseudomonas sp. GM18 RepID=J2NLZ7_9PSED rbh
Bcl-2 family protein {ECO:0000313|EMBL:BAQ74067.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
SAM-dependent methyltransferase
Displaying items 1-30 of 238 in total

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