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S15_scaffold_411_curated

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_411_curated_1
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(293..751)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0002EA6FD0
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EIK73705.1}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
S15_scaffold_411_curated_2
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(784..1152)
DNA (369bp) protein (123aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R4D6_9PSED
antibiotic biosynthesis monooxygenase domain protein
Antibiotic biosynthesis monooxygenase domain protein {ECO:0000313|EMBL:EIK73190.1}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
S15_scaffold_411_curated_3
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1285..1713
DNA (429bp) protein (143aa)
Putative transcription regulator protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R6W3_9PSED
putative transcription regulator protein
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EIK71906.1}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
S15_scaffold_411_curated_4
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1907..2338
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KEP6_PSEF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY91454.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_411_curated_5
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3072..3503)
DNA (432bp) protein (144aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
Alkylhydroperoxidase AhpD family core domain protein n=2 Tax=Pseudomonas protegens RepID=Q4KEN8_PSEF5
alkylhydroperoxidase
S15_scaffold_411_curated_6
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3531..4151)
DNA (621bp) protein (207aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
azoR4; FMN-dependent NADH-azoreductase (EC:1.7.-.-) rbh
FMN-dependent NADH-azoreductase n=1 Tax=Pseudomonas fluorescens RepID=UPI0002FD8D9F rbh
S15_scaffold_411_curated_7
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4148..4594)
DNA (447bp) protein (149aa)
GCN5 family acetyltransferase n=1 Tax=Pseudomonas fluorescens RepID=UPI0002EFB69E
PhnO-like protein
PhnO-like protein {ECO:0000313|EMBL:BAQ73825.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
S15_scaffold_411_curated_8
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4682..6085
DNA (1404bp) protein (468aa)
DNA-binding protein n=1 Tax=Pseudomonas fluorescens RepID=UPI00030398AB rbh
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:BAQ80112.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
S15_scaffold_411_curated_9
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6313..6660
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF161 RepID=S6KDD2_9PSED
Uncharacterized protein {ECO:0000313|EMBL:BAQ73831.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
S15_scaffold_411_curated_10
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6786..7109
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Pseudomonas syringae RepID=UPI0001E29587
Uncharacterized protein {ECO:0000313|EMBL:BAQ73832.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein
S15_scaffold_411_curated_11
Pseudomonas sp. GM17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7292..7693)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4REA3_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJM12845.1}; TaxID=1144323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM17.;"
S15_scaffold_411_curated_12
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8079..8339)
DNA (261bp) protein (87aa)
transposase ISPpu13 n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00036485DB
ISPpu13, transposase Orf3 {ECO:0000313|EMBL:EPB97095.1}; TaxID=1330531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida NB2011.;"
ISPpu13, transposase Orf3
S15_scaffold_411_curated_13
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8472..9512)
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=E2MBY5_PSEUB rbh
Uncharacterized protein {ECO:0000313|EMBL:BAQ80118.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
hypothetical protein
S15_scaffold_411_curated_14
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9646..10233
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=E2MBY4_PSEUB
Uncharacterized protein {ECO:0000313|EMBL:BAQ80119.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
hypothetical protein
S15_scaffold_411_curated_15
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10350..10673
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens Q8r1-96 RepID=I4KYZ1_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:BAQ73832.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein
S15_scaffold_411_curated_16
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11088..11369)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0002FC4DF2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ80121.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
S15_scaffold_411_curated_17
Pseudomonas extremaustralis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12074..12877)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Pseudomonas putida RepID=UPI000300C58E
Uncharacterized protein {ECO:0000313|EMBL:EZI24099.1}; TaxID=1117958 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas extremaustralis 14-3 substr. 14-3b.;"
hypothetical protein
S15_scaffold_411_curated_18
Pseudomonas sp. GM60, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13105..14172
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM60 RepID=J3B3L9_9PSED rbh
Uncharacterized protein {ECO:0000313|EMBL:EJM77253.1}; TaxID=1144334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM60.;"
hypothetical protein
S15_scaffold_411_curated_19
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14435..15235)
DNA (801bp) protein (267aa)
Amino acid ABC transporter, ATP-binding protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KEN2_PSEF5 rbh
ABC transporter-like protein {ECO:0000313|EMBL:BAQ73839.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
amino acid ABC transporter ATP-binding protein rbh
S15_scaffold_411_curated_20
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15252..16493)
DNA (1242bp) protein (414aa)
D-amino acid dehydrogenase small subunit DadA n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R6Y2_9PSED rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:BAQ73840.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
FAD dependent oxidoreductase
S15_scaffold_411_curated_21
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16540..17250)
DNA (711bp) protein (237aa)
amino acid ABC transporter permease n=1 Tax=Pseudomonas fluorescens RepID=UPI0002F5DF3E rbh
His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
His/Glu/Gln/Arg/opine family amino acid ABC transporter permease {ECO:0000313|EMBL:BAQ80128.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
S15_scaffold_411_curated_22
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17247..17966)
DNA (720bp) protein (240aa)
Histidine transport system permease protein HisQ n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RI64_9PSED rbh
His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
His/Glu/Gln/Arg/opine family amino acid ABC transporter permease {ECO:0000313|EMBL:BAQ80129.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
S15_scaffold_411_curated_23
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18053..18805)
DNA (753bp) protein (251aa)
Amino acid ABC transporter, periplasmic amino acid-binding protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KEM8_PSEF5 rbh
amino acid ABC transporter substrate-binding protein rbh
Amino acid ABC transporter, periplasmic amino acid-binding protein {ECO:0000313|EMBL:AAY91472.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_411_curated_24
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18822..19697)
DNA (876bp) protein (292aa)
Transcriptional regulator, RpiR family/SIS domain protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KEM7_PSEF5 rbh
RpiR family transcriptional regulator/SIS domain-containing protein rbh
Transcriptional regulator, RpiR family/SIS domain protein {ECO:0000313|EMBL:AAY91473.2}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_411_curated_25
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19975..21021
DNA (1047bp) protein (349aa)
Malate/L-lactate dehydrogenase family protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KEM6_PSEF5 rbh
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:BAQ73845.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
malate/L-lactate dehydrogenase
S15_scaffold_411_curated_26
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21230..22414
DNA (1185bp) protein (395aa)
membrane protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0002F9BF14 rbh
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:BAQ73846.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
S15_scaffold_411_curated_27
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22669..23832
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KEM4_PSEF5 rbh
GfdT protein {ECO:0000313|EMBL:BAQ73847.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
GfdT protein
S15_scaffold_411_curated_28
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23801..26398
DNA (2598bp) protein (866aa)
ATPase n=1 Tax=Pseudomonas fluorescens RepID=UPI0003783B46 rbh
Two-component sensor histidine kinase PedS1 {ECO:0000313|EMBL:BAQ73848.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
pedS1; two-component sensor histidine kinase PedS1 rbh
S15_scaffold_411_curated_29
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26805..27470)
DNA (666bp) protein (222aa)
Glycerol metabolism activator n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R6Z0_9PSED rbh
agmR2; glycerol metabolism activator rbh
Two-component transcriptional regulator PedR1 {ECO:0000313|EMBL:AAY91478.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_411_curated_30
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27517..28059)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4REC3_9PSED rbh
Rhodanese domain-containing protein {ECO:0000313|EMBL:BAQ73850.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein rbh
Displaying items 1-30 of 37 in total

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