ggKbase home page

S16_scaffold_638_curated

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_638_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..859
DNA (858bp) protein (286aa)
autotransporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035DDCCB
Outer membrane autotransporter {ECO:0000313|EMBL:EZP46684.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
outer membrane autotransporter barrel domain-containing protein
S16_scaffold_638_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1148..1570)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FUQ2_STRMK
Uncharacterized protein {ECO:0000313|EMBL:EZP46685.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_638_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1943..2983
DNA (1041bp) protein (347aa)
Peptidase S41 n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K2S5_STEMA rbh
Peptidase S41 {ECO:0000313|EMBL:EZP46686.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
peptidase S41 rbh
S16_scaffold_638_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3013..3324
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KSS8_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP46687.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_638_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3388..3801
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CQY2_STEMA
Putative transcription regulator containing HTH domain protein {ECO:0000313|EMBL:EZP46688.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_638_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3836..4270
DNA (435bp) protein (145aa)
Uncharacterized protein n=3 Tax=Stenotrophomonas maltophilia RepID=B2FUP6_STRMK
Uncharacterized protein {ECO:0000313|EMBL:EZP46689.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_638_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4328..5491)
DNA (1164bp) protein (388aa)
Multifunctional CCA protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5THF6_STEMA rbh
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
cca; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase rbh
S16_scaffold_638_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5565..7550)
DNA (1986bp) protein (662aa)
lytic murein transglycosylase n=1 Tax=Pseudomonas geniculata RepID=UPI00029A7601 rbh
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EZP46691.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
lytic transglycosylase rbh
S16_scaffold_638_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7702..8109
DNA (408bp) protein (136aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K2R7_STEMA
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EZP46692.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
biopolymer transport protein ExbD/TolR
S16_scaffold_638_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8479..11343
DNA (2865bp) protein (955aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K2R5_STEMA rbh
TonB-dependent receptor {ECO:0000313|EMBL:EZP46693.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TonB-dependent receptor rbh
S16_scaffold_638_curated_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11423..13582)
DNA (2160bp) protein (720aa)
TonB-dependent siderophore receptor n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K2R3_STEMA rbh
Putative TonB-dependent receptor {ECO:0000313|EMBL:EZP46694.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TonB-dependent siderophore receptor rbh
S16_scaffold_638_curated_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13765..14334)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VLG3_STEMA rbh
Peptidase, M23/M37 family {ECO:0000313|EMBL:EZP46695.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
endopeptidase rbh
S16_scaffold_638_curated_13
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14378..14851)
DNA (474bp) protein (158aa)
Transcriptional regulator, AsnC family n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K2R1_STEMA
Transcriptional regulator {ECO:0000313|EMBL:EZP46696.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
AsnC family transcriptional regulator
S16_scaffold_638_curated_14
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14948..15799
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SIY1_STRM5 rbh
Integral membrane protein {ECO:0000313|EMBL:EZP46697.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_638_curated_15
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15962..16699)
DNA (738bp) protein (246aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L3L9_9GAMM rbh
Putative endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EZP46698.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
endonuclease/exonuclease/phosphatase rbh
S16_scaffold_638_curated_16
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16752..17567)
DNA (816bp) protein (272aa)
DSBA oxidoreductase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SIX9_STRM5 rbh
DSBA oxidoreductase {ECO:0000313|EMBL:EZP46699.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
DSBA oxidoreductase rbh
S16_scaffold_638_curated_17
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17674..18159)
DNA (486bp) protein (162aa)
Thiol:disulfide interchange protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CQC3_STEMA rbh
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
DSBA oxidoreductase rbh
Displaying 17 items

View Taxonomy