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S16_scaffold_635_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_635_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..194)
DNA (192bp) protein (64aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KIJ8_STEMA
Vitamin B12 transporter btuB {ECO:0000313|EMBL:EZP42970.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TonB-dependent receptor
S16_scaffold_635_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

364..840
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K5C4_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP42971.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_635_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(915..2231)
DNA (1317bp) protein (439aa)
ABC transporter permease n=2 Tax=Bacteria RepID=B8L9Y6_9GAMM rbh
ABC transporter permease {ECO:0000313|EMBL:EZP42972.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
ABC transporter transmembrane permease rbh
S16_scaffold_635_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2245..3402)
DNA (1158bp) protein (386aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DC19CC rbh
ABC-type antimicrobial peptide transport system,permease component {ECO:0000313|EMBL:EZP42973.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
transmembrane permease rbh
S16_scaffold_635_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3417..4106)
DNA (690bp) protein (230aa)
ABC transporter related n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4STB5_STRM5 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZP42974.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
ABC transporter-like protein rbh
S16_scaffold_635_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4224..5471)
DNA (1248bp) protein (416aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K5C8_STEMA rbh
Multidrug resistance protein mdtA {ECO:0000313|EMBL:EZP42975.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
RND family efflux transporter MFP subunit rbh
S16_scaffold_635_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5674..6009
DNA (336bp) protein (112aa)
ABC transporter related n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4STB7_STRM5
Nod factor export ATP-binding protein I {ECO:0000313|EMBL:EZP42976.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
ABC transporter-like protein
S16_scaffold_635_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6016..7230
DNA (1215bp) protein (405aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4STB9_STRM5 rbh
Two-component system sensor protein {ECO:0000313|EMBL:EZP42977.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
integral membrane sensor signal transduction histidine kinase rbh
S16_scaffold_635_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7227..7829
DNA (603bp) protein (201aa)
Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas maltophilia RepID=B4STC0_STRM5 rbh
Transcriptional regulatory protein degU {ECO:0000313|EMBL:EZP42978.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
two component LuxR family transcriptional regulator rbh
S16_scaffold_635_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8350..8886)
DNA (537bp) protein (179aa)
Putative cytochromeb-561 n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CTV8_STEMA rbh
Cytochrome b561 {ECO:0000313|EMBL:EZP42979.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
cytochrome b561 rbh
S16_scaffold_635_curated_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8883..9989)
DNA (1107bp) protein (369aa)
Catalase-related peroxidase {ECO:0000256|PIRNR:PIRNR000296}; EC=1.11.1.- {ECO:0000256|PIRNR:PIRNR000296};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
catalase n=1 Tax=Pseudomonas geniculata RepID=UPI00029B0E74 rbh
catalase related subgroup domain-containing protein rbh
S16_scaffold_635_curated_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10158..11525)
DNA (1368bp) protein (456aa)
Leucine aminopeptidase 2, chloroplastic {ECO:0000256|SAAS:SAAS00070899}; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00279693};; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00070892};; Leucine aminopeptidase 3, chloroplastic {ECO:0000256|SAAS:SAAS00070897}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
peptidase B (EC:3.4.11.23) rbh
Leucine aminopeptidase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TW01_STEMA rbh
S16_scaffold_635_curated_13
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11529..12257)
DNA (729bp) protein (243aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=2 Tax=Stenotrophomonas maltophilia RepID=B4STC4_STRM5 rbh
HAD-superfamily hydrolase {ECO:0000313|EMBL:EZP42982.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
HAD-superfamily hydrolase rbh
S16_scaffold_635_curated_14
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12320..12790)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Xanthomonadaceae RepID=UPI00029A31C9
Uncharacterized protein {ECO:0000313|EMBL:EZP42983.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_635_curated_15
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12757..13953)
DNA (1197bp) protein (399aa)
UPF0118 membrane protein yrrI n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CSW4_STEMA rbh
Putative permease perM {ECO:0000313|EMBL:EZP42984.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_635_curated_16
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14021..14458)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K5D8_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP42985.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_635_curated_17
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14455..14925)
DNA (471bp) protein (157aa)
Uncharacterized protein n=3 Tax=Stenotrophomonas maltophilia RepID=J7VK67_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP42986.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
transmembrane protein
S16_scaffold_635_curated_18
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14934..15296)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9X1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EZP42987.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_635_curated_19
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15401..16213)
DNA (813bp) protein (271aa)
protease Do (EC:3.4.21.108) rbh
heat-shock protein n=1 Tax=Pseudomonas geniculata RepID=UPI00029A25DD rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP42988.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Displaying 19 items

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