ggKbase home page

S16_scaffold_846_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_846_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1185
DNA (1185bp) protein (395aa)
Conserved hypothetical exported protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FM98_STRMK rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP42431.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_846_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1190..2530
DNA (1341bp) protein (447aa)
ABC transporter substrate-binding protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KUN3_STEMA rbh
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:EZP42432.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
family 1 extracellular solute-binding protein rbh
S16_scaffold_846_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2527..3408
DNA (882bp) protein (294aa)
ABC-type transporter, integral membrane subunit n=5 Tax=Stenotrophomonas RepID=G0JVQ5_STEMA rbh
ABC transporter permease {ECO:0000313|EMBL:EZP42433.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
ABC transporter permease rbh
S16_scaffold_846_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3405..4241
DNA (837bp) protein (279aa)
Sugar ABC transporter, sugar permease protein 2 USSDB1D n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U057_STEMA rbh
Sugar ABC transporter, sugar permease protein 2 USSDB1D {ECO:0000313|EMBL:EZP42434.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
ABC transporter permease rbh
S16_scaffold_846_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4238..7405
DNA (3168bp) protein (1056aa)
Coagulation factor 5/8 type domain protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JVQ3_STEMA rbh
Coagulation factor 5/8 type domain-containing protein {ECO:0000313|EMBL:EZP42435.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
coagulation factor 5/8 type domain-containing protein rbh
S16_scaffold_846_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7408..8292
DNA (885bp) protein (295aa)
endonuclease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D6A123 rbh
Putative secreted protein {ECO:0000313|EMBL:EZP42436.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
endonuclease/exonuclease/phosphatase rbh
S16_scaffold_846_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8408..10285)
DNA (1878bp) protein (626aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Ribonuclease E n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9G0_9GAMM
ribonuclease, Rne/Rng family
Displaying 7 items

View Taxonomy