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S16_scaffold_1486_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_1486_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..418
DNA (417bp) protein (139aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VBF8_STEMA
S16_scaffold_1486_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(576..1145)
DNA (570bp) protein (190aa)
Protein tonB n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5D128_STEMA
TonB family protein {ECO:0000313|EMBL:EZP45488.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TonB family protein
S16_scaffold_1486_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1264..1908)
DNA (645bp) protein (215aa)
TonB family protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K5Q0_STEMA rbh
Putative TonB domain protein {ECO:0000313|EMBL:EZP45487.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TonB family protein rbh
S16_scaffold_1486_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2022..3302
DNA (1281bp) protein (427aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
serS; seryl-tRNA synthetase (EC:6.1.1.11) rbh
Serine--tRNA ligase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L501_9GAMM rbh
S16_scaffold_1486_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3434..3784)
DNA (351bp) protein (117aa)
Variant SH3 domain-containing protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K5P8_STEMA
Variant SH3 domain protein {ECO:0000313|EMBL:EZP45485.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
variant SH3 domain-containing protein
S16_scaffold_1486_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3915..4502)
DNA (588bp) protein (196aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
FMN-dependent NADH-azoreductase n=2 Tax=Stenotrophomonas maltophilia RepID=B4SP38_STRM5 rbh
NAD(P)H dehydrogenase (quinone) rbh
S16_scaffold_1486_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4625..5617
DNA (993bp) protein (331aa)
Transcriptional regulator, LysR family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SNK7_STRM5 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EZP45483.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
LysR family transcriptional regulator rbh
S16_scaffold_1486_curated_trna_1
unknown

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5703..5789
DNA (87bp)
transferRNA Ser
S16_scaffold_1486_curated_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5846..6073)
DNA (228bp) protein (76aa)
AlpA family transcriptional regulator n=1 Tax=Pseudomonas geniculata RepID=UPI00029A67A1
phage transcriptional regulator AlpA
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ACF52230.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
S16_scaffold_1486_curated_9
unknown

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comp(6060..6215)
DNA (156bp) protein (52aa)

This feature has no annotations

S16_scaffold_1486_curated_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6208..6606)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KM59_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH12148.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
Displaying 11 items

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