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S16_scaffold_507_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_507_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..838
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7V3I9_STEMA rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EZP43124.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
LysR family transcriptional regulator rbh
S16_scaffold_507_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1091..2752)
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMD6_STEMA rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
DNA repair protein RecN rbh
S16_scaffold_507_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2868..3932
DNA (1065bp) protein (355aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SSQ4_STRM5 rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hrcA; heat-inducible transcription repressor rbh
S16_scaffold_507_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3996..4511
DNA (516bp) protein (172aa)
heat shock protein GrpE n=1 Tax=Xanthomonadaceae RepID=UPI00029ABA77 rbh
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
protein grpE rbh
S16_scaffold_507_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4715..6640
DNA (1926bp) protein (642aa)
Chaperone protein DnaK n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=DNAK_STRM5 rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
dnaK; molecular chaperone DnaK rbh
S16_scaffold_507_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6795..7928
DNA (1134bp) protein (378aa)
Chaperone protein DnaJ n=2 Tax=Stenotrophomonas maltophilia RepID=DNAJ_STRM5 rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
chaperone protein DnaJ rbh
S16_scaffold_507_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8028..8825)
DNA (798bp) protein (266aa)
AraC family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037E5571 rbh
HTH-type transcriptional activator rhaS {ECO:0000313|EMBL:EZP43118.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
AraC family transcriptional regulator rbh
S16_scaffold_507_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8977..10098
DNA (1122bp) protein (374aa)
Major facilitator superfamily MFS_1 n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SSQ9_STRM5 rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:EZP43117.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
major facilitator superfamily protein rbh
S16_scaffold_507_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10681..11589
DNA (909bp) protein (303aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Pyridoxal kinase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L1W4_9GAMM rbh
pyridoxal kinase rbh
S16_scaffold_507_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11586..12719
DNA (1134bp) protein (378aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:EZP43115.1}; EC=1.3.1.12 {ECO:0000313|EMBL:EZP43115.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Prephenate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CYB5_STEMA rbh
prephenate dehydrogenase rbh
S16_scaffold_507_curated_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12888..13082)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L1J0_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP43114.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_507_curated_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13163..14941)
DNA (1779bp) protein (593aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G346_STEMA rbh
Lipid A ABC exporter family (Fused ATPase and inner membrane subunits) {ECO:0000313|EMBL:EZP43113.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
ABC transporter ATP-binding protein rbh
S16_scaffold_507_curated_13
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14934..15539)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SSR4_STRM5 rbh
IMPACT family member yvyE {ECO:0000313|EMBL:EZP43112.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_507_curated_14
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15565..15906)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SSR5_STRM5
Membrane protein {ECO:0000313|EMBL:EZP43111.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
Displaying 14 items

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