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S16_scaffold_380_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_380_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..492
DNA (492bp) protein (164aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Primosomal protein N' (Replication factor Y) (Superfamily II helicase) n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CRF9_STEMA
priA; primosome assembly protein PriA
S16_scaffold_380_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(606..1226)
DNA (621bp) protein (207aa)
Putative glutathione S-transferase-family protein n=2 Tax=Stenotrophomonas maltophilia RepID=B2FIT1_STRMK rbh
Glutathione S-transferase family protein {ECO:0000313|EMBL:EZP45271.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
glutathione S-transferase family protein rbh
S16_scaffold_380_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1305..1496
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KP42_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP45270.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
S16_scaffold_380_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1554..2348)
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SKJ5_STRM5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP45269.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_380_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2470..3750
DNA (1281bp) protein (427aa)
NADH dehydrogenase (ubiquinone) (EC:1.6.5.3) rbh
NADH dehydrogenase (Ubiquinone) n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K548_STEMA rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EZP45268.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
S16_scaffold_380_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4156..4611)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3DS05_STEMA
Putative transmembrane protein {ECO:0000313|EMBL:EZP45267.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
transmembrane protein
S16_scaffold_380_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4615..5046)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas RepID=M5CR78_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP45266.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_380_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5119..5376)
DNA (258bp) protein (86aa)
UPF0213 protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CRG3_STEMA
Nuclease {ECO:0000313|EMBL:EZP45265.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
GIY-YIG nuclease superfamily protein
S16_scaffold_380_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5708..6325
DNA (618bp) protein (206aa)
Bicyclomycin/multidrug efflux system n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8C3_9GAMM rbh
Bicyclomycin/multidrug efflux system {ECO:0000313|EMBL:EZP45264.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_380_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6543..7709
DNA (1167bp) protein (389aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SKK2_STRM5 rbh
Putative multidrug efflux transporter MdtA {ECO:0000313|EMBL:EZP45263.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
RND family efflux transporter MFP subunit rbh
S16_scaffold_380_curated_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7706..10837
DNA (3132bp) protein (1044aa)
Acriflavin resistance protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SKK3_STRM5 rbh
Acriflavin resistance protein {ECO:0000313|EMBL:EZP45262.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
acriflavin resistance protein rbh
S16_scaffold_380_curated_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10834..13893
DNA (3060bp) protein (1020aa)
Acriflavin resistance protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SKK4_STRM5 rbh
Acriflavin resistance protein {ECO:0000313|EMBL:EZP45261.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
acriflavin resistance protein rbh
S16_scaffold_380_curated_13
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14104..15177)
DNA (1074bp) protein (358aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54) rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K553_STEMA rbh
S16_scaffold_380_curated_14
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15431..15691)
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SKK7_STRM5
Uncharacterized protein {ECO:0000313|EMBL:EZP45259.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_380_curated_15
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15880..16617)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D3V3_STEMA rbh
DNA alkylation repair protein {ECO:0000313|EMBL:EZP45258.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_380_curated_16
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16614..17114)
DNA (501bp) protein (167aa)
MarR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KNX1_STEMA
Transcriptional regulator slyA {ECO:0000313|EMBL:EZP45257.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
MarR family transcriptional regulator
S16_scaffold_380_curated_17
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17293..18456
DNA (1164bp) protein (388aa)
Beta-lactamase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TGY4_STEMA rbh
Beta-lactamase {ECO:0000313|EMBL:EZP45256.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
beta-lactamase rbh
S16_scaffold_380_curated_18
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18614..20263)
DNA (1650bp) protein (550aa)
60 kDa chaperonin n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=CH60_STRM5 rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
groEL; chaperonin GroEL rbh
S16_scaffold_380_curated_19
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20346..20633)
DNA (288bp) protein (96aa)
10 kDa chaperonin n=6 Tax=Stenotrophomonas maltophilia RepID=CH10_STRMK
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
groES; heat shock protein 60 family co-chaperone GroES
S16_scaffold_380_curated_20
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20986..22776
DNA (1791bp) protein (597aa)
Extracellular ribonuclease precursor (EC:3.1.-.-) rbh
Extracellular ribonuclease n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KTD1_STEMA rbh
Extracellular ribonuclease {ECO:0000313|EMBL:EZP45253.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
S16_scaffold_380_curated_21
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22845..23183
DNA (339bp) protein (113aa)
CutA1 divalent ion tolerance protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SKM1_STRM5
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:EZP45252.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
CutA1 divalent ion tolerance protein
S16_scaffold_380_curated_22
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23180..24547
DNA (1368bp) protein (456aa)
Thiol:disulfide interchange protein DsbD {ECO:0000313|EMBL:EZP45251.1}; EC=1.8.1.8 {ECO:0000313|EMBL:EZP45251.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
protein-disulfide reductase (EC:1.8.1.8) rbh
Protein-disulfide reductase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K566_STEMA rbh
Displaying 22 items

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