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S16_scaffold_1740_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_1740_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(169..1263)
DNA (1095bp) protein (365aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
dinP; DNA polymerase IV (EC:2.7.7.7) rbh
DNA polymerase IV n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJ42_STEMA rbh
S16_scaffold_1740_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1455..1970
DNA (516bp) protein (172aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
3-hydroxydecanoyl-ACP dehydratase (EC:4.2.1.60) rbh
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CT39_STEMA rbh
S16_scaffold_1740_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1970..3178
DNA (1209bp) protein (403aa)
fabB; 3-oxoacyl-ACP synthase (EC:2.3.1.41) rbh
Beta-ketoacyl-[ACP] synthase I n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TQV8_STEMA rbh
Beta-ketoacyl-[ACP] synthase I {ECO:0000313|EMBL:EZP45368.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
S16_scaffold_1740_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3384..4067)
DNA (684bp) protein (228aa)
Pyrophosphatase ppaX {ECO:0000313|EMBL:EZP45369.1}; EC=3.6.1.1 {ECO:0000313|EMBL:EZP45369.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3F156_STEMA rbh
haloacid dehalogenase rbh
S16_scaffold_1740_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4064..4765)
DNA (702bp) protein (234aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Pseudouridine synthase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L192_9GAMM rbh
pseudouridine synthase Rsu rbh
S16_scaffold_1740_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4762..5892)
DNA (1131bp) protein (377aa)
Ribosomal RNA small subunit methyltransferase C n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CJ84_STEMA rbh
Ribosomal RNA small subunit methyltransferase C {ECO:0000313|EMBL:EZP45371.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
methyltransferase small rbh
S16_scaffold_1740_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5965..6228
DNA (264bp) protein (88aa)
Uncharacterized protein n=7 Tax=Stenotrophomonas RepID=B2FLQ6_STRMK
Uncharacterized protein {ECO:0000313|EMBL:EZP45372.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_1740_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6390..6680)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L195_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EZP45373.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_1740_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6725..8710)
DNA (1986bp) protein (662aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3) rbh
PAS domain S-box protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7V6A7_STEMA rbh
Histidine kinase {ECO:0000313|EMBL:EZP45374.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Displaying 9 items

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