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S16_scaffold_464_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_464_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1387)
DNA (1386bp) protein (462aa)
RpoH suppressor n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KMV1_STEMA rbh
Patatin {ECO:0000313|EMBL:EZP42900.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
RpoH suppressor rbh
S16_scaffold_464_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1861..2544
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036EAF61 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP42899.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_464_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2602..3228
DNA (627bp) protein (209aa)
Nicotinamidase/pyrazinamidase {ECO:0000313|EMBL:EZP42898.1}; EC=3.5.1.19 {ECO:0000313|EMBL:EZP42898.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
pncA; pyrazinamidase/nicotinamidase (EC:3.5.1.-) rbh
Nicotinamidase/pyrazinamidase n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CSG3_STEMA rbh
S16_scaffold_464_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3374..3880
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FJ02_STRMK
Uncharacterized protein {ECO:0000313|EMBL:EZP42897.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_464_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3880..4095
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FJ02_STRMK
Uncharacterized protein {ECO:0000313|EMBL:EZP42896.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_464_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4088..4984)
DNA (897bp) protein (299aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
formyltetrahydrofolate deformylase (EC:3.5.1.10) rbh
Formyltetrahydrofolate deformylase n=2 Tax=Stenotrophomonas RepID=M5CIV0_STEMA rbh
S16_scaffold_464_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5053..5964
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K4J2_STEMA rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EZP42894.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
LysR family transcriptional regulator rbh
S16_scaffold_464_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5968..7071)
DNA (1104bp) protein (368aa)
FMN oxidoreductase n=2 Tax=Stenotrophomonas maltophilia RepID=M3F0I2_STEMA rbh
Oxidoreductase {ECO:0000313|EMBL:EZP42893.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
NADH/FMN oxidoreductase rbh
S16_scaffold_464_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7239..8084)
DNA (846bp) protein (282aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01967}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01967};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01967}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
NAD-dependent deacetylase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DEFAC7 rbh
NAD-dependent deacetylase rbh
S16_scaffold_464_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8089..8499)
DNA (411bp) protein (137aa)
acyl-CoA hydrolase (EC:3.1.2.20)
Thioesterase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KJW1_STEMA
Acyl-CoA hydrolase {ECO:0000313|EMBL:EZP42891.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
S16_scaffold_464_curated_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8593..9228
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7V7S1_STEMA rbh
Threonine efflux protein {ECO:0000313|EMBL:EZP42890.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Threonine efflux protein rbh
S16_scaffold_464_curated_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9373..9672)
DNA (300bp) protein (100aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SSN0_STRM5
S16_scaffold_464_curated_13
unknown

Not on your lists

10103..10315
DNA (213bp) protein (71aa)

This feature has no annotations

S16_scaffold_464_curated_14
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10520..12931)
DNA (2412bp) protein (804aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
ribonucleoside-diphosphate reductase subunit alpha (EC:1.17.4.1) rbh
Ribonucleoside-diphosphate reductase n=2 Tax=Stenotrophomonas maltophilia RepID=B4SSM9_STRM5 rbh
S16_scaffold_464_curated_15
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13527..14627)
DNA (1101bp) protein (367aa)
ATPase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LA40_9GAMM rbh
AFG1 family ATPase {ECO:0000313|EMBL:EZP42887.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
AFG1 family ATPase rbh
S16_scaffold_464_curated_16
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14624..15295)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K4I0_STEMA rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:EZP42886.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_464_curated_17
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15339..16196
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K4H9_STEMA rbh
Putative transmembrane protein {ECO:0000313|EMBL:EZP42885.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_464_curated_18
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16353..16730
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7UVK4_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP42884.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_464_curated_19
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16778..18217)
DNA (1440bp) protein (480aa)
Nuclease n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LA43_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP42883.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
endonuclease/exonuclease/phosphatase rbh
Displaying 19 items

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