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S18_scaffold_37_curated

Search features with annotation key words

Displaying items 1-30 of 168 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S18_scaffold_37_curated_1
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152..727)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI000360B2E1 rbh
hypothetical protein rbh
UPF0312 protein MDS_0474 {ECO:0000256|HAMAP-Rule:MF_00780}; Flags: Precursor;; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_37_curated_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(789..1334)
DNA (546bp) protein (182aa)
cytochrome B561 n=1 Tax=Pseudomonas mendocina RepID=UPI00037D406D rbh
cytochrome b561 rbh
Cytochrome b561 {ECO:0000313|EMBL:AEB56504.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_37_curated_3
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1583..2989
DNA (1407bp) protein (469aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; EC=2.6.1.62 {ECO:0000256|HAMAP-Rule:MF_00834};; 7,8-diamino-pelargonic acid aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; 7,8-diaminononanoate synthase {ECO:0000256|HAMAP-Rule:MF_00834}; Diaminopelargonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00834}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Pseudomonas mendocina RepID=UPI0003732372 rbh
adenosylmethionine-8-amino-7-oxononanoate aminotransferase rbh
S18_scaffold_37_curated_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3070..3789
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZS4_PSEMN rbh
16S ribosomal RNA methyltransferase RsmE rbh
S18_scaffold_37_curated_5
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4001..5473
DNA (1473bp) protein (491aa)
Amino acid carrier protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZS3_PSEMN rbh
Sodium:alanine symporter {ECO:0000313|EMBL:EZH78075.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
amino acid carrier protein rbh
S18_scaffold_37_curated_6
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5552..6022)
DNA (471bp) protein (157aa)
Putative CheW protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZS2_PSEMN
Chemotaxis protein {ECO:0000313|EMBL:KFJ92989.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
putative CheW protein
S18_scaffold_37_curated_7
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6033..7052)
DNA (1020bp) protein (340aa)
CheB methylesterase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZS1_PSEMN rbh
CheB methylesterase rbh
CheB methylesterase {ECO:0000313|EMBL:AEB56499.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_37_curated_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7049..14335)
DNA (7287bp) protein (2429aa)
chemotaxis protein CheA n=1 Tax=Pseudomonas mendocina RepID=UPI000361046B rbh
CheA signal transduction histidine kinase rbh
CheA signal transduction histidine kinase {ECO:0000313|EMBL:AEB56498.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_37_curated_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14361..15239)
DNA (879bp) protein (293aa)
pilK; protein-glutamate O-methyltransferase (EC:2.1.1.80)
Methyltransferase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UCT3_PSEME rbh
Methyltransferase {ECO:0000313|EMBL:ERH52827.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
S18_scaffold_37_curated_10
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15282..17318)
DNA (2037bp) protein (679aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZR8_PSEMN rbh
methyl-accepting chemotaxis sensory transducer rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AEB56496.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_37_curated_11
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17400..17939)
DNA (540bp) protein (180aa)
Putative CheW protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZR7_PSEMN rbh
putative CheW protein rbh
Putative CheW protein {ECO:0000313|EMBL:AEB56495.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_37_curated_12
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17985..18350)
DNA (366bp) protein (122aa)
Response regulator receiver protein n=2 Tax=Pseudomonas RepID=F4DZR6_PSEMN
response regulator receiver protein
Chemotaxis protein CheY {ECO:0000313|EMBL:EZH78068.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
S18_scaffold_37_curated_13
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18398..18805)
DNA (408bp) protein (136aa)
Response regulator receiver protein n=3 Tax=Pseudomonas aeruginosa group RepID=A4XPB0_PSEMY
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:CDM38923.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
S18_scaffold_37_curated_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19048..20004
DNA (957bp) protein (319aa)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00162}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Glutathione synthetase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZR4_PSEMN rbh
glutathione synthetase rbh
S18_scaffold_37_curated_15
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20093..20989
DNA (897bp) protein (299aa)
TonB family protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZR3_PSEMN rbh
TonB family protein rbh
TonB family protein {ECO:0000313|EMBL:AEB56491.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_37_curated_16
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21160..21729
DNA (570bp) protein (190aa)
UPF0301 protein MDS_0459 n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZR2_PSEMN rbh
hypothetical protein rbh
UPF0301 protein MDS_0459 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_37_curated_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21729..22163
DNA (435bp) protein (145aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Putative Holliday junction resolvase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZR1_PSEMN
Holliday junction resolvase-like protein
S18_scaffold_37_curated_18
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22194..22697
DNA (504bp) protein (168aa)
pyrR; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JHM4_PSEPS rbh
Uracil phosphoribosyltransferase {ECO:0000313|EMBL:KFJ93000.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
S18_scaffold_37_curated_19
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22709..23716
DNA (1008bp) protein (336aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Aspartate carbamoyltransferase n=2 Tax=Pseudomonas mendocina RepID=PYRB_PSEMY rbh
aspartate carbamoyltransferase catalytic subunit rbh
S18_scaffold_37_curated_20
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23716..24987
DNA (1272bp) protein (424aa)
pyrC1; dihydroorotase (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
Dihydroorotase n=1 Tax=Pseudomonas mendocina DLHK RepID=J7UFS0_PSEME rbh
S18_scaffold_37_curated_21
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25245..27152
DNA (1908bp) protein (636aa)
beta-ketoacyl synthase n=1 Tax=Pseudomonas mendocina RepID=UPI000381D044 rbh
Beta-ketoacyl synthase {ECO:0000313|EMBL:AEB56485.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
beta-ketoacyl synthase rbh
S18_scaffold_37_curated_22
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27255..28079)
DNA (825bp) protein (275aa)
3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZQ6_PSEMN rbh
3'(2'),5'-bisphosphate nucleotidase rbh
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:AEB56484.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_37_curated_23
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28076..28642)
DNA (567bp) protein (189aa)
ADP-ribose diphosphatase NudE n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZQ5_PSEMN rbh
ADP-ribose diphosphatase NudE rbh
ADP-ribose diphosphatase NudE {ECO:0000313|EMBL:AEB56483.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_37_curated_24
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28768..29430
DNA (663bp) protein (221aa)
HAD family hydrolase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZQ4_PSEMN rbh
HAD family hydrolase rbh
HAD family hydrolase {ECO:0000313|EMBL:AEB56482.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_37_curated_25
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29681..30505)
DNA (825bp) protein (275aa)
Formate dehydrogenase family accessory protein FdhD n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZQ3_PSEMN rbh
formate dehydrogenase family accessory protein FdhD rbh
Protein FdhD homolog {ECO:0000256|SAAS:SAAS00093832}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_37_curated_26
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30576..30824)
DNA (249bp) protein (83aa)
formate dehydrogenase subunit delta (EC:1.2.1.2)
Formate dehydrogenase delta subunit {ECO:0000313|EMBL:ABP83163.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ABP83163.1};; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
Formate dehydrogenase subunit delta n=1 Tax=Pseudomonas mendocina DLHK RepID=J7U9E1_PSEME
S18_scaffold_37_curated_27
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30922..33756)
DNA (2835bp) protein (945aa)
Formate dehydrogenase subunit alpha n=1 Tax=Pseudomonas mendocina DLHK RepID=J7TJ57_PSEME rbh
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:AEB56479.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
formate dehydrogenase subunit alpha rbh
S18_scaffold_37_curated_28
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33772..35343)
DNA (1572bp) protein (524aa)
NADH dehydrogenase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZQ0_PSEMN rbh
NADH dehydrogenase {ECO:0000313|EMBL:AEB56478.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
NADH dehydrogenase rbh
S18_scaffold_37_curated_29
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35340..35834)
DNA (495bp) protein (165aa)
formate dehydrogenase subunit gamma n=1 Tax=Pseudomonas mendocina RepID=UPI0003723BD7 rbh
NADH dehydrogenase (ubiquinone), 24 kDa subunit rbh
NADH dehydrogenase (Ubiquinone), 24 kDa subunit {ECO:0000313|EMBL:AEB56477.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_37_curated_30
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36033..37121
DNA (1089bp) protein (363aa)
Molybdate metabolism transcriptional regulator n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZP8_PSEMN rbh
molybdate metabolism transcriptional regulator rbh
Molybdate metabolism transcriptional regulator {ECO:0000313|EMBL:AEB56476.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Displaying items 1-30 of 168 in total

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