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S18_scaffold_786_curated

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S18_scaffold_786_curated_1
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..344)
DNA (342bp) protein (114aa)
amidohydrolase n=1 Tax=Pseudomonas mendocina RepID=UPI00036BC0E2
amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:AEB60720.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_786_curated_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(341..919)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQW5_PSEMN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB60721.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_786_curated_3
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(983..1717)
DNA (735bp) protein (245aa)
Isochorismatase hydrolase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQW6_PSEMN rbh
isochorismatase hydrolase rbh
Isochorismatase hydrolase {ECO:0000313|EMBL:AEB60722.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_786_curated_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1980..2441
DNA (462bp) protein (154aa)
Endoribonuclease L-PSP n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQW7_PSEMN
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AEB60724.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_786_curated_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2438..3433)
DNA (996bp) protein (332aa)
Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Q2-87 RepID=J2Y4T8_PSEFL rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EJL02166.1}; TaxID=1038922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens Q2-87.;"
LysR family transcriptional regulator rbh
S18_scaffold_786_curated_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3527..4840)
DNA (1314bp) protein (438aa)
FAD dependent oxidoreductase n=1 Tax=Pseudomonas mendocina DLHK RepID=J7UFQ3_PSEME rbh
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABP87112.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
S18_scaffold_786_curated_7
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4947..6314)
DNA (1368bp) protein (456aa)
glutamate--putrescine ligase (EC:6.3.1.11) rbh
Glutamate--putrescine ligase {ECO:0000313|EMBL:AEF20210.1}; EC=6.3.1.11 {ECO:0000313|EMBL:AEF20210.1};; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva (strain 12-X).;"
Glutamate--putrescine ligase n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AED5_PSEF1 rbh
S18_scaffold_786_curated_8
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6435..6596)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina DLHK RepID=J7U4M8_PSEME
Uncharacterized protein {ECO:0000313|EMBL:EIK94714.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;"
S18_scaffold_786_curated_9
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6747..8318)
DNA (1572bp) protein (524aa)
Laminin subunit gamma-1Laminin B2 chainPrecursor n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 PF9_PSEPS">RepID=I7JPF9_PSEPS rbh
Chemotaxis protein {ECO:0000313|EMBL:KJU79559.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
mcp11; Laminin subunit gamma-1
S18_scaffold_786_curated_10
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8688..9764)
DNA (1077bp) protein (359aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Pseudomonas mendocina RepID=UPI00035CE299 rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AEB60729.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_786_curated_11
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9761..10774)
DNA (1014bp) protein (338aa)
AraC family transcriptional regulator n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQX4_PSEMN rbh
AraC family transcriptional regulator rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:AEB60730.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_786_curated_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10878..11936
DNA (1059bp) protein (353aa)
Fatty acid desaturase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQX5_PSEMN rbh
fatty acid desaturase rbh
Fatty acid desaturase {ECO:0000313|EMBL:AEB60731.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_786_curated_13
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12105..14984
DNA (2880bp) protein (960aa)
diguanylate cyclase n=1 Tax=Pseudomonas mendocina RepID=UPI00035C80FF rbh
diguanylate cyclase/phosphodiesterase rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AEB60733.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_786_curated_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14972..16186)
DNA (1215bp) protein (405aa)
Putative signal transduction protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQX7_PSEMN rbh
putative signal transduction protein rbh
Putative signal transduction protein {ECO:0000313|EMBL:AEB60732.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_786_curated_15
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16449..16604)
DNA (156bp) protein (52aa)
50S ribosomal protein L33 n=5 Tax=Pseudomonas RepID=F4DQX8_PSEMN
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
S18_scaffold_786_curated_16
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16615..16836)
DNA (222bp) protein (74aa)
50S ribosomal protein L28 n=8 Tax=Pseudomonas RepID=RL28_PSEMY
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
Displaying 16 items

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