ggKbase home page

S18_scaffold_1128_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S18_scaffold_1128_curated_1
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..944)
DNA (942bp) protein (314aa)
Tn7-like transposition protein C n=3 Tax=Pseudomonas RepID=I1A851_PSEAI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM42955.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
S18_scaffold_1128_curated_2
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(941..3109)
DNA (2169bp) protein (723aa)
Tn7-like transposition protein B n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JGK9_PSEST rbh
tnsB1; Transposon Tn7 transposition protein tnsB
Transposon Tn7 transposition protein tnsB {ECO:0000313|EMBL:CDM42956.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
S18_scaffold_1128_curated_3
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3106..3843)
DNA (738bp) protein (246aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I4JGL0_PSEST rbh
TnsA endonuclease-like protein
TnsA endonuclease-like protein {ECO:0000313|EMBL:CDM42957.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
S18_scaffold_1128_curated_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4242..6092)
DNA (1851bp) protein (617aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Pseudomonas mendocina DLHK RepID=J7TQB9_PSEME rbh
glucosamine--fructose-6-phosphate aminotransferase rbh
S18_scaffold_1128_curated_5
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6106..6876)
DNA (771bp) protein (257aa)
DeoR family transcriptional regulator n=1 Tax=Pseudomonas mendocina DLHK RepID=J7U6M9_PSEME rbh
glmR; Glycerol-3-phosphate regulon repressor
XRE family transcriptional regulator {ECO:0000313|EMBL:KFJ91848.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
S18_scaffold_1128_curated_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6950..7561)
DNA (612bp) protein (204aa)
Amino acid transporter LysE n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UBN3_PSEME rbh
Amino acid transporter LysE {ECO:0000313|EMBL:ERH52447.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
Leucine efflux protein
S18_scaffold_1128_curated_7
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7617..8975)
DNA (1359bp) protein (453aa)
bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase n=1 Tax=Pseudomonas mendocina RepID=UPI00035DC898 rbh
glucosamine-1-phosphate N-acetyltransferase/UDP-N-acetylglucosamine pyrophosphorylase rbh
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_1128_curated_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9101..9535)
DNA (435bp) protein (145aa)
atpC; F0F1 ATP synthase subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T2V9_PSEME
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
S18_scaffold_1128_curated_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9615..10478)
DNA (864bp) protein (288aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14) rbh
ATP synthase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
ATP synthase subunit beta n=1 Tax=Pseudomonas mendocina DLHK RepID=J7TQC3_PSEME rbh
Displaying 9 items

View Taxonomy