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S19_scaffold_1917_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S19_scaffold_1917_curated_1
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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39..1007
DNA (969bp) protein (323aa)
carbamate kinase (EC:2.7.2.2) rbh
Carbamate kinase n=2 Tax=Clostridium RepID=D8GJV5_CLOLD rbh
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
S19_scaffold_1917_curated_2
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1369..2031
DNA (663bp) protein (221aa)
ornithine carbamoyltransferase n=1 Tax=Coriobacteriaceae RepID=UPI00034709A7
Putative ornithine carbamoyltransferase {ECO:0000313|EMBL:EUB31472.1}; TaxID=1190621 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella uli MSTE5.;"
putrescine carbamoyltransferase
S19_scaffold_1917_curated_3
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2474..3358
DNA (885bp) protein (295aa)
Putative methyl-accepting chemotaxis transducer protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LF90_ACEWD
putative methyl-accepting chemotaxis transducer protein
Putative methyl-accepting chemotaxis transducer protein {ECO:0000313|EMBL:AFA48190.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
S19_scaffold_1917_curated_4
Mogibacterium sp. CM50, Mogibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4000..4401
DNA (402bp) protein (134aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=936375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis; Mogibacterium.;" source="Mogibacterium sp. CM50.;"
Nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Mogibacterium sp. CM50 RepID=J6HKJ4_9FIRM
S19_scaffold_1917_curated_5
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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4508..4957
DNA (450bp) protein (150aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JI34_FUSVA
S19_scaffold_1917_curated_6
unknown

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5077..5265
DNA (189bp) protein (63aa)

This feature has no annotations

S19_scaffold_1917_curated_7
unknown

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6083..6238
DNA (156bp) protein (52aa)

This feature has no annotations

S19_scaffold_1917_curated_8
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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6238..6612
DNA (375bp) protein (125aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
growth inhibitor PemK n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37D53
MazF; growth inhibitor
S19_scaffold_1917_curated_9
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6609..7070
DNA (462bp) protein (154aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Clostridium sp. BNL1100 RepID=H2J979_9CLOT
site-specific recombinase, DNA invertase Pin
Site-specific recombinase, DNA invertase Pin {ECO:0000313|EMBL:AEY67609.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
S19_scaffold_1917_curated_10

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comp(7125..7721)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EZB4_9DELT
Marine sediment metagenome DNA, contig: S01H1_L04730 {ECO:0000313|EMBL:GAF70199.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S19_scaffold_1917_curated_11
Lactobacillus buchneri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8200..9015
DNA (816bp) protein (272aa)
Transcriptional regulator, LuxR family n=1 Tax=Lactobacillus buchneri ATCC 11577 RepID=C0WRS7_LACBU
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEI19345.1}; TaxID=525318 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus buchneri ATCC 11577.;"
LuxR family transcriptional regulator
S19_scaffold_1917_curated_12
unknown

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9669..9842
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 12 items

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