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S19_scaffold_2133_curated

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S19_scaffold_2133_curated_1
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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69..1475
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AEF8_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CCX39392.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
Putative peptidoglycan-binding domain-containing protein
S19_scaffold_2133_curated_2
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(1767..2402)
DNA (636bp) protein (212aa)
CotJC protein id=4069645 bin=GWF2_Clostridiales_36_10 species=Ruminococcus albus genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute rbh
Mn-containing catalase rbh
Tax=GWF2_Clostridiales_36_10_curated
S19_scaffold_2133_curated_3
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2378..2629)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGE0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG29471.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
S19_scaffold_2133_curated_4
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2630..2881)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGE1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG29472.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
S19_scaffold_2133_curated_5
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3173..4147
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRI3_CLOPH rbh
srpi protein
Srpi protein {ECO:0000313|EMBL:AHV95501.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
S19_scaffold_2133_curated_6
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4514..5452
DNA (939bp) protein (313aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
Putative cysteine desulfurase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T5E0_9GAMM rbh
sufS; cysteine desulfurase, SufS family protein
S19_scaffold_2133_curated_7
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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5656..5943
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FL14_9FIRM
30S ribosomal protein S6
Tax=BJP_IG2103_Clostridiales_50_15
S19_scaffold_2133_curated_8
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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6070..6492
DNA (423bp) protein (141aa)
Single-stranded DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DY76_9FIRM
single-strand binding protein
Tax=BJP_IG2103_Clostridiales_50_15
S19_scaffold_2133_curated_9
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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6510..6743
DNA (234bp) protein (78aa)
30S ribosomal protein S18 n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DQE7_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
30S ribosomal protein S18
S19_scaffold_2133_curated_10
unknown

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comp(6992..7180)
DNA (189bp) protein (63aa)

This feature has no annotations

S19_scaffold_2133_curated_11
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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7688..9568
DNA (1881bp) protein (627aa)
DHHA1 domain protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F111_9FIRM rbh
phosphoesterase domain-containing protein rbh
Tax=BJP_IG2103_Clostridiales_50_15
S19_scaffold_2133_curated_12
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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9608..10051
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E0V1_9FIRM
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
50S ribosomal protein L9
S19_scaffold_2133_curated_13
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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10218..11423
DNA (1206bp) protein (402aa)
Replicative DNA helicase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DZ78_9FIRM rbh
replicative DNA helicase rbh
Tax=BJP_IG2103_Clostridiales_50_15
S19_scaffold_2133_curated_14
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11434..11634
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VQ21_CLOSH
hybrid cluster protein
Uncharacterized protein {ECO:0000313|EMBL:AGC67653.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
S19_scaffold_2133_curated_15
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11680..12870
DNA (1191bp) protein (397aa)
adenylosuccinate synthetase (EC:6.3.4.4) rbh
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00011};; IMP--aspartate ligase {ECO:0000255|HAMAP-Rule:MF_00011}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
Adenylosuccinate synthetase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=PURA_ALKMQ rbh
Displaying 15 items

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