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S20_scaffold_17_curated

Search features with annotation key words

Displaying items 1-30 of 474 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S20_scaffold_17_curated_1
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

217..1728
DNA (1512bp) protein (504aa)
Lipoprotein, putative id=2045291 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
lipoprotein rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S20_scaffold_17_curated_2
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1876..3681
DNA (1806bp) protein (602aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Sensor histidine kinase, PAS, GAF and GAF domain-containing n=2 Tax=Geobacter metallireducens RepID=Q39RF1_GEOMG rbh
sensor histidine kinase, PAS, GAF and GAF domain-containing rbh
S20_scaffold_17_curated_3
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4120..5628
DNA (1509bp) protein (503aa)
cyaA; adenylate cyclase 1 (EC:4.6.1.1) rbh
Adenylate cyclase 1 n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L8C3_SIMNZ rbh
Adenylate cyclase {ECO:0000313|EMBL:KGP62203.1}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
S20_scaffold_17_curated_4
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5780..6943)
DNA (1164bp) protein (388aa)
Putative uncharacterized protein id=4161985 bin=GWC2_Geobacteraceae_55_20 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
S20_scaffold_17_curated_5
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7788..9020)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M7P6_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM22152.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S20_scaffold_17_curated_6
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9304..9687
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M252_GEODF
hypothetical protein
Helix-turn-helix XRE domain and DUF2384 protein {ECO:0000313|EMBL:ACM21170.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S20_scaffold_17_curated_7
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9647..10366
DNA (720bp) protein (240aa)
RES domain protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M251_GEODF rbh
RES domain protein {ECO:0000313|EMBL:ACM21169.2}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
RES domain-containing protein rbh
S20_scaffold_17_curated_8
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(10402..11181)
DNA (780bp) protein (260aa)
NADP oxidoreductase coenzyme F420-dependent id=2981786 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
coenzyme F420-dependent NADP oxidoreductase
Tax=GWC2_Nitrospirae_56_14_curated
S20_scaffold_17_curated_9
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

11385..12848
DNA (1464bp) protein (488aa)
Transcriptional regulator, GntR family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4B1_GEOUR rbh
GntR family transcriptional regulator rbh
Tax=GWC2_Nitrospirae_56_14_curated
S20_scaffold_17_curated_10
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12861..13085)
DNA (225bp) protein (75aa)
4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-] id=12498081 bin=THIO_MID species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=THIO_MID organism_group=Betaproteobacteria
4-oxalocrotonate tautomerase
Tax=BJP_IG2069_Desfulfarculales_53_13
S20_scaffold_17_curated_11
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

13463..14173
DNA (711bp) protein (237aa)
Tetratricopeptide TPR_2 repeat protein id=2981795 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
hypothetical protein
Tax=GWC2_Nitrospirae_56_14_curated
S20_scaffold_17_curated_12
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

14285..15490
DNA (1206bp) protein (402aa)
Tetratricopeptide TPR_1 repeat-containing protein id=2981799 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
hypothetical protein rbh
Tax=GWC2_Nitrospirae_56_14_curated
S20_scaffold_17_curated_13
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15687..16619
DNA (933bp) protein (311aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein id=2055633 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
phosphonate ABC transporter substrate-binding protein
Tax=GWD2_Desulfuromonadales_54_10_curated
S20_scaffold_17_curated_14
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16624..18216
DNA (1593bp) protein (531aa)
Sensor histidine kinase, DUF3365 and PAS domain-containing, heme-binding id=2810941 bin=GWC2_Geobacteraceae_55_20 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
PAS/PAC sensor signal transduction histidine kinase
Tax=GWC2_Geobacteraceae_53_11_curated
S20_scaffold_17_curated_15
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18357..20609)
DNA (2253bp) protein (751aa)
Flagellar hook capping protein n=1 Tax=Geobacter metallireducens RCH3 RepID=H1L9C6_GEOME rbh
cytochrome c rbh
Cytochrome c {ECO:0000313|EMBL:ABB30537.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S20_scaffold_17_curated_16
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20845..22212
DNA (1368bp) protein (456aa)
Amidohydrolase 2 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3N6_GEODF rbh
amidohydrolase rbh
Tax=GWC2_Geobacteraceae_58_44_curated
S20_scaffold_17_curated_17
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22797..23954
DNA (1158bp) protein (386aa)
Putative uncharacterized protein id=4161985 bin=GWC2_Geobacteraceae_55_20 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
hypothetical protein rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S20_scaffold_17_curated_18
unknown

Not on your lists

comp(23882..24052)
DNA (171bp) protein (57aa)

This feature has no annotations

S20_scaffold_17_curated_19
Moumouvirus, Viruses

Not on your lists

comp(24126..24365)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Moumouvirus goulette RepID=M1PWS4_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:AGF85212.1}; TaxID=1247379 species="Viruses; dsDNA viruses, no RNA stage; Mimiviridae; unclassified Mimiviridae.;" source="Moumouvirus goulette.;"
S20_scaffold_17_curated_20
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24962..25258)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E6S1_GEOLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD94896.1}; Flags: Precursor;; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
S20_scaffold_17_curated_21
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25310..26365)
DNA (1056bp) protein (352aa)
Arsenite efflux pump n=2 Tax=Bacteria RepID=B5EF52_GEOBB rbh
arsB-1; arsenite efflux pump rbh
Arsenite efflux pump {ECO:0000313|EMBL:ACM20568.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S20_scaffold_17_curated_22
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26507..26923)
DNA (417bp) protein (139aa)
Protein tyrosine phosphatase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WRE0_GEOS8
Arsenate reductase {ECO:0000313|EMBL:KFN37865.1}; TaxID=1538640 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;"
protein tyrosine phosphatase
S20_scaffold_17_curated_23
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26960..27298)
DNA (339bp) protein (113aa)
Transcriptional regulator, ArsR family n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M9J5_GEODF
ArsR family transcriptional regulator
Tax=GWC2_Geobacteraceae_58_44_curated
S20_scaffold_17_curated_24
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27468..28253
DNA (786bp) protein (262aa)
Histidinol-phosphate phosphatase, putative n=2 Tax=Geobacter metallireducens RepID=Q39XT5_GEOMG rbh
histidinol phosphate phosphatase
Histidinol phosphate phosphatase {ECO:0000313|EMBL:AJE04916.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S20_scaffold_17_curated_25
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28465..29727)
DNA (1263bp) protein (421aa)
Glutamate dehydrogenase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1APQ5_PELPD rbh
Glu/Leu/Phe/Val dehydrogenase rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
S20_scaffold_17_curated_26
Trichophyton tonsurans, Trichophyton, Onygenales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

comp(30182..30613)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HYK5_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EGD92985.1}; TaxID=647933 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Arthrodermataceae; Trichophyton.;" source="Trichophyton tonsurans (strain CBS 112818) (Scalp ringworm fungus).;"
hypothetical protein
S20_scaffold_17_curated_27
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30768..31172)
DNA (405bp) protein (135aa)
ATP-independent chaperone, alpha-crystallin/Hsp20 family id=4186809 bin=GWF2_Geobacter_54_21 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
ATP-independent chaperone
Tax=GWC2_Geobacteraceae_55_20_curated
S20_scaffold_17_curated_28
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31193..31642)
DNA (450bp) protein (150aa)
Heat shock protein Hsp20 n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EA88_GEOLS
Molecular chaperone {ECO:0000313|EMBL:AJY70226.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
hspA-2; ATP-independent chaperone
S20_scaffold_17_curated_29
unknown

Not on your lists

comp(31790..31984)
DNA (195bp) protein (65aa)

This feature has no annotations

S20_scaffold_17_curated_30
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32144..32761
DNA (618bp) protein (206aa)
Peptide methionine sulfoxide reductase MsrA id=4857751 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
msrA; peptide methionine sulfoxide reductase msrA
Tax=RBG_16_Gammaproteobacteria_57_12_curated
Displaying items 1-30 of 474 in total

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