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S20_scaffold_323_curated

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S20_scaffold_323_curated_1
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34..1245)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5ECB4_GEOBB rbh
membrane protein rbh
Tax=GWC2_Geobacteraceae_58_44_curated
S20_scaffold_323_curated_2
unknown

Not on your lists

1354..1470
DNA (117bp) protein (39aa)

This feature has no annotations

S20_scaffold_323_curated_3
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1526..2401)
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SNZ0_HAHCH
Uncharacterized protein {ECO:0000313|EMBL:CDI02989.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
S20_scaffold_323_curated_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2719..2880)
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7N6_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27804.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S20_scaffold_323_curated_5
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2895..3134)
DNA (240bp) protein (80aa)
Putative uncharacterized protein id=4221224 bin=GWF2_Syntrophobacterales_56_9 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_58_17_curated
S20_scaffold_323_curated_6
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3728..4516
DNA (789bp) protein (263aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2E0_GEODF rbh
endonuclease/exonuclease/phosphatase rbh
Metal-dependent hydrolase {ECO:0000313|EMBL:ACM19319.2}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S20_scaffold_323_curated_7
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4513..6081
DNA (1569bp) protein (523aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2E1_GEODF rbh
phospholipase D/Transphosphatidylase rbh
Phospholipase D superfamily protein {ECO:0000313|EMBL:ACM19320.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S20_scaffold_323_curated_8
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6605..8104
DNA (1500bp) protein (500aa)
Lipopolysaccharide biosynthesis n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AT07_PELPD
lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis {ECO:0000313|EMBL:ABL00478.1}; Flags: Precursor;; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
S20_scaffold_323_curated_9
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8362..9591
DNA (1230bp) protein (410aa)
Glycosyl transferase, group 1 n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGW3_SYNFM
Uncharacterized protein {ECO:0000313|EMBL:KFO68068.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
group 1 glycosyl transferase
S20_scaffold_323_curated_10

Not on your lists

9605..10564
DNA (960bp) protein (320aa)
Glycosyltransferase n=2 Tax=Bacteria RepID=B5EGZ3_GEOBB rbh
family glycosyltransferase rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD59278.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S20_scaffold_323_curated_11
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10677..11705
DNA (1029bp) protein (343aa)
Putative uncharacterized protein id=1750044 bin=GWD2_Desulfuromonadales_54_10 species=Stanieria cyanosphaera genus=Stanieria taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
family 2 glycosyl transferase
Tax=GWD2_Desulfuromonadales_54_10_curated
S20_scaffold_323_curated_12
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11738..12640
DNA (903bp) protein (301aa)
Glycosyl transferase, family 2 id=1750052 bin=GWD2_Desulfuromonadales_54_10 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
family 2 glycosyl transferase
Tax=GWD2_Desulfuromonadales_54_10_curated
S20_scaffold_323_curated_13
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12882..14249
DNA (1368bp) protein (456aa)
O-antigen polymerase id=1750053 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
exopolysaccharide biosynthesis lipoprotein rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S20_scaffold_323_curated_14
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14268..15794
DNA (1527bp) protein (509aa)
Polysaccharide biosynthesis protein id=1750040 bin=GWD2_Desulfuromonadales_54_10 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
polysaccharide biosynthesis protein rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S20_scaffold_323_curated_15
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15798..16790
DNA (993bp) protein (331aa)
Glycosyl transferase family 2 id=1957632 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
glycosyl transferase family protein
Tax=BJP_IG2069_Desfulfarculales_53_13
S20_scaffold_323_curated_16
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16959..18416
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Bacillus cereus HuB5-5 RepID=J8DNQ2_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJQ77820.1}; TaxID=1053212 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus HuB5-5.;"
hypothetical protein
S20_scaffold_323_curated_17
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18654..20393)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EGZ7_GEOBB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACH38099.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
S20_scaffold_323_curated_18
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20465..22030)
DNA (1566bp) protein (522aa)
Fibronectin type III domain protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M0U3_GEODF rbh
fibronectin type III domain-containing protein rbh
Malectin domain pair protein {ECO:0000313|EMBL:ACM20946.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S20_scaffold_323_curated_19
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22270..23571
DNA (1302bp) protein (434aa)
Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Geobacter sp. (strain M21) RepID=C6DYH1_GEOSM rbh
cytochrome bd ubiquinol oxidase subunit I rbh
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:ACT18255.1}; Flags: Precursor;; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
S20_scaffold_323_curated_20
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23568..24590
DNA (1023bp) protein (341aa)
Cytochrome bd ubiquinol oxidase subunit II n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2E5_GEODF rbh
cytochrome bd ubiquinol oxidase subunit II rbh
Cytochrome bd menaquinol oxidase, subunit II {ECO:0000313|EMBL:ACM19324.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S20_scaffold_323_curated_21
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(24724..27471)
DNA (2748bp) protein (916aa)
Cytochrome C family protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCS5_GEOUR rbh
cytochrome C family protein rbh
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
S20_scaffold_323_curated_22
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27707..28882)
DNA (1176bp) protein (392aa)
SAM-dependent methyltransferase, PUA domain-containing n=2 Tax=Geobacter metallireducens RepID=Q39XD7_GEOMG rbh
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AJE02586.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S20_scaffold_323_curated_23
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28993..29268)
DNA (276bp) protein (92aa)
Transcriptional regulator, ArsR family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEQ0_GEOUR
regulatory protein ArsR
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABQ25905.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S20_scaffold_323_curated_24
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29343..30317)
DNA (975bp) protein (325aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M5P0_GEODF rbh
peptide ABC transporter ATP-binding protein
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJE02588.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S20_scaffold_323_curated_25
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30314..31276)
DNA (963bp) protein (321aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEQ2_GEOUR rbh
oligopeptide/dipeptide ABC transporter ATPase rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABQ25907.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S20_scaffold_323_curated_26
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31372..33447)
DNA (2076bp) protein (692aa)
Metal dependent phosphohydrolase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEQ3_GEOUR rbh
metal dependent phosphohydrolase rbh
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ABQ25908.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S20_scaffold_323_curated_27
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33834..34964
DNA (1131bp) protein (377aa)
SpoIID/LytB domain n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEQ4_GEOUR rbh
SpoIID/LytB domain-containing protein rbh
SpoIID/LytB domain {ECO:0000313|EMBL:ABQ25909.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S20_scaffold_323_curated_28
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35020..36051
DNA (1032bp) protein (344aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000255|HAMAP-Rule:MF_00113}; EC=2.4.99.17 {ECO:0000255|HAMAP-Rule:MF_00113};; Queuosine biosynthesis protein QueA {ECO:0000255|HAMAP-Rule:MF_00113}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Geobacter sulfurreducens RepID=QUEA_GEOSL rbh
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase rbh
S20_scaffold_323_curated_29
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36113..37222
DNA (1110bp) protein (370aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29) rbh
Queuine tRNA-ribosyltransferase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WME2_GEOS8 rbh
Tax=GWC2_Geobacteraceae_58_44_curated
S20_scaffold_323_curated_30
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37347..37676
DNA (330bp) protein (110aa)
Protein translocase subunit yajC n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEQ7_GEOUR
Uncharacterized protein {ECO:0000313|EMBL:GAM08053.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
preprotein translocase subunit YajC
Displaying items 1-30 of 39 in total

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