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S20_scaffold_547_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S20_scaffold_547_curated_1
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(144..1364)
DNA (1221bp) protein (407aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Tyrosine--tRNA ligase n=2 Tax=Geobacter sulfurreducens RepID=SYY_GEOSL rbh
tyrS; tyrosyl-tRNA ligase rbh
S20_scaffold_547_curated_2
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1395..2183)
DNA (789bp) protein (263aa)
Metallophosphoesterase n=1 Tax=Geobacter sp. (strain M21) RepID=C6E4M1_GEOSM rbh
metallophosphoesterase rbh
Metallophosphoesterase {ECO:0000313|EMBL:ACT19317.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
S20_scaffold_547_curated_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2173..3735)
DNA (1563bp) protein (521aa)
Ribonuclease Y {ECO:0000255|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000255|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00335};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Ribonuclease Y n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=RNY_GEOUR rbh
phosphodiesterase rbh
S20_scaffold_547_curated_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3810..4355)
DNA (546bp) protein (182aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAT2_GEOUR
5-formyltetrahydrofolate cyclo-ligase
S20_scaffold_547_curated_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4691..4951)
DNA (261bp) protein (87aa)
Cell division protein ZapA n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAV2_GEOUR
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S20_scaffold_547_curated_6
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4980..5156)
DNA (177bp) protein (59aa)
Cell division protein ZapB n=2 Tax=Geobacter sulfurreducens RepID=D7AHR6_GEOSK
zapB; cell division protein ZapB
Cell division protein ZapB {ECO:0000313|EMBL:AJY70854.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
S20_scaffold_547_curated_7
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5212..6378)
DNA (1167bp) protein (389aa)
Signal recognition particle receptor FtsY n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AU89_PELPD rbh
signal recognition particle-docking protein FtsY rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
S20_scaffold_547_curated_8
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6379..6738)
DNA (360bp) protein (120aa)
GTPase-activating protein, putative n=2 Tax=Geobacter sulfurreducens RepID=D7AHR4_GEOSK
GTPase
GTPase {ECO:0000313|EMBL:AJE03811.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S20_scaffold_547_curated_9
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6787..10320)
DNA (3534bp) protein (1178aa)
Chromosome partition protein Smc n=2 Tax=Geobacter metallireducens RepID=Q39WG2_GEOMG rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
chromosome segregation protein SMC
S20_scaffold_547_curated_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10422..13700
DNA (3279bp) protein (1093aa)
AsmA family protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA21_GEOUR rbh
AsmA family protein {ECO:0000313|EMBL:ABQ25572.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
AsmA family protein rbh
S20_scaffold_547_curated_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13817..14233
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA20_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25571.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S20_scaffold_547_curated_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14281..15963)
DNA (1683bp) protein (561aa)
Radical SAM domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA19_GEOUR rbh
radical SAM domain-containing protein rbh
Radical SAM domain protein {ECO:0000313|EMBL:ABQ25570.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S20_scaffold_547_curated_13
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15941..16354)
DNA (414bp) protein (138aa)
NUDIX hydrolase, MutT family n=2 Tax=Geobacter metallireducens RepID=Q39WG6_GEOMG
DNA mismatch repair protein MutT
DNA mismatch repair protein MutT {ECO:0000313|EMBL:AJE03959.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S20_scaffold_547_curated_14
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16525..17550)
DNA (1026bp) protein (342aa)
NLP/P60 protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZB1_GEODF rbh
NLP/P60 protein rbh
Murein/chitin-binding protein, LysM, LysM and NLPC_P60 domain-containing {ECO:0000313|EMBL:ACM20664.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S20_scaffold_547_curated_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17637..19085)
DNA (1449bp) protein (483aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA38_GEOUR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ25568.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S20_scaffold_547_curated_16
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19393..20901)
DNA (1509bp) protein (503aa)
Lipoprotein cytochrome c n=2 Tax=Geobacter metallireducens RepID=Q39X69_GEOMG rbh
lipoprotein cytochrome c rbh
Lipoprotein cytochrome c {ECO:0000313|EMBL:ABB31155.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Multiheme cytochrome with 9 heme-binding motifs Tyler Arbour (4/8/17)
S20_scaffold_547_curated_17
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20925..21590)
DNA (666bp) protein (222aa)
Cytochrome c n=2 Tax=Geobacter metallireducens RepID=Q39X70_GEOMG rbh
cytochrome c rbh
Cytochrome c {ECO:0000313|EMBL:ABB31154.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Multiheme cytochrome with 8 CxxCH motifs Tyler Arbour (4/8/17)
S20_scaffold_547_curated_18
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21633..22844)
DNA (1212bp) protein (404aa)
porin, Geobacter OmbB-like (GSU2733), likely part of OM porin-cytochrome complex
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39X71_GEOMG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB31153.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S20_scaffold_547_curated_19
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23073..25259)
DNA (2187bp) protein (729aa)
Lipoprotein cytochrome c, 12 heme-binding sites n=2 Tax=Geobacter sulfurreducens RepID=D7ALQ0_GEOSK rbh
omcB; lipoprotein cytochrome c rbh
C-type polyheme cytochrome OmcB; Outer membrane c-type cytochrome B; Flags: Precursor;; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
OmcB-like multiheme cytochrome with 12 CxxCH motifs Tyler Arbour (4/8/17)
Displaying 19 items

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