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S20_scaffold_388_curated

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S20_scaffold_388_curated_1
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(226..2070)
DNA (1845bp) protein (615aa)
Carbon starvation protein CstA n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M1L3_GEODF rbh
Carbon starvation protein CstA {ECO:0000313|EMBL:ACM21095.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
carbon starvation protein CstA rbh
S20_scaffold_388_curated_2
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2168..3826)
DNA (1659bp) protein (553aa)
Acyl-CoA synthetase, AMP-forming n=2 Tax=Geobacter sulfurreducens RepID=D7AHN6_GEOSK rbh
acyl-CoA synthetase, AMP-forming rbh
AMP-binding protein {ECO:0000313|EMBL:AJY70824.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
S20_scaffold_388_curated_3
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4169..4441
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE46_GEOUR
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
S20_scaffold_388_curated_4
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

4447..5247
DNA (801bp) protein (267aa)
Metal-dependent phosphohydrolase, HD sub domain n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6N6_GEOUR
metal-dependent phosphohydrolase
Tax=GWC2_Nitrospirae_57_9_curated
S20_scaffold_388_curated_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5285..5929
DNA (645bp) protein (215aa)
Import inner membrane translocase, subunit Tim44 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6N4_GEOUR
import inner membrane translocase subunit Tim44
Import inner membrane translocase, subunit Tim44 {ECO:0000313|EMBL:ABQ27452.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S20_scaffold_388_curated_6
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6449..7243
DNA (795bp) protein (265aa)
Sel1 domain protein repeat-containing protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZE9_GEODF
Uncharacterized protein {ECO:0000313|EMBL:GAM07775.1}; Flags: Precursor;; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Sel1 domain-containing protein repeat-containing protein
S20_scaffold_388_curated_7
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7562..7738
DNA (177bp) protein (59aa)
membrane protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000361C807
protein of unknown function DUF1328
UPF0391 membrane protein OR16_28439 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
S20_scaffold_388_curated_8
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7749..8453)
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H9Q7_ANADF
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
S20_scaffold_388_curated_9
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8468..8752)
DNA (285bp) protein (95aa)
Acyl carrier protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EH02_GEOBB
acpP-7; ACP
Tax=GWC2_Geobacteraceae_58_44_curated
S20_scaffold_388_curated_10
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8788..9813)
DNA (1026bp) protein (342aa)
nadE; NAD synthetase (EC:6.3.1.5) rbh
NH(3)-dependent NAD(+) synthetase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2U6_GEODF rbh
Tax=GWC2_Geobacteraceae_58_44_curated
S20_scaffold_388_curated_11
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9810..11840)
DNA (2031bp) protein (677aa)
Asparagine synthetase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ASZ8_PELPD rbh
asparagine synthase rbh
Tax=GWC2_Geobacteraceae_58_44_curated
S20_scaffold_388_curated_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12227..13087)
DNA (861bp) protein (287aa)
Pseudouridine synthase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5P6_GEOUR rbh
RluA family pseudouridine synthase rbh
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:ABQ27114.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S20_scaffold_388_curated_13
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13366..13788)
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39YE1_GEOMG
Uncharacterized protein {ECO:0000313|EMBL:GAM09243.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
hypothetical protein
S20_scaffold_388_curated_14
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13975..15498)
DNA (1524bp) protein (508aa)
Radical SAM domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9L0_GEOUR rbh
Putative methyltransferase {ECO:0000313|EMBL:GAM10865.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
radical SAM domain-containing protein rbh
S20_scaffold_388_curated_15
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15628..16587)
DNA (960bp) protein (320aa)
Peptidase, M48 family n=2 Tax=Geobacter sulfurreducens RepID=D7AHX1_GEOSK rbh
peptidase M48
Peptidase M48 {ECO:0000313|EMBL:AJE03750.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S20_scaffold_388_curated_16
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16649..17680)
DNA (1032bp) protein (344aa)
tRNA (5-carboxymethylaminomethyl-2-seleno-U34)-2-selenouridine synthase n=2 Tax=Geobacter metallireducens RepID=Q39T15_GEOMG rbh
tRNA 2-selenouridine synthase
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S20_scaffold_388_curated_17
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17950..19230
DNA (1281bp) protein (427aa)
Ketose-1,6-bisphosphate aldolase, class II, putative n=2 Tax=Geobacter metallireducens RepID=Q39T16_GEOMG rbh
ketose-bisphosphate aldolase
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:GAM10733.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
S20_scaffold_388_curated_18
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19350..19730
DNA (381bp) protein (127aa)
Putative uncharacterized protein id=1872512 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Desulfuromonadales_54_10_curated
S20_scaffold_388_curated_19
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19730..20542
DNA (813bp) protein (271aa)
Putative uncharacterized protein id=1872510 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Desulfuromonadales_54_10_curated
S20_scaffold_388_curated_20
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20618..21640)
DNA (1023bp) protein (341aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Geobacter sp. (strain M21) RepID=C6E8R7_GEOSM rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT16206.1}; Flags: Precursor;; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
S20_scaffold_388_curated_21
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21852..22004
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WQ41_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW15150.1}; Flags: Precursor;; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
S20_scaffold_388_curated_22
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22356..23690
DNA (1335bp) protein (445aa)
ATP-dependent RNA helicase RhlE n=2 Tax=Geobacter metallireducens RepID=Q39R66_GEOMG rbh
rhlE-1; ATP-dependent RNA helicase RhlE rbh
ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:ABB33258.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S20_scaffold_388_curated_23
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23875..24573
DNA (699bp) protein (233aa)
Uncharacterized protein id=1779380 bin=GWB2_Pelobacter_53_15 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB33666.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S20_scaffold_388_curated_24
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24621..25118
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBY4_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE02818.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S20_scaffold_388_curated_25
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25644..26456
DNA (813bp) protein (271aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M777_GEODF rbh
electron transfer flavoprotein subunit alpha/beta rbh
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:ACM20165.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S20_scaffold_388_curated_26
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26648..27985
DNA (1338bp) protein (446aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M778_GEODF rbh
electron transfer flavoprotein subunit alpha rbh
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:ACM20166.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S20_scaffold_388_curated_27
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28020..30011
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M779_GEODF rbh
hypothetical protein rbh
Electron transfer flavoprotein-associated cytochrome b and CCG domain pair iron-sulfur cluster-binding oxidoreductase {ECO:0000313|EMBL:ACM20167.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S20_scaffold_388_curated_28
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30311..31309
DNA (999bp) protein (333aa)
Uncharacterized protein id=3768583 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
S20_scaffold_388_curated_29
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31420..33507)
DNA (2088bp) protein (696aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9S6_GEOUR rbh
methyl-accepting chemotaxis sensory transducer rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABQ28544.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S20_scaffold_388_curated_30
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33896..35545
DNA (1650bp) protein (550aa)
manganese-dependent inorganic pyrophosphatase (EC:3.6.1.1) rbh
Inorganic diphosphatase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M9I4_GEODF rbh
Uncharacterized protein {ECO:0000313|EMBL:ACM20556.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Displaying items 1-30 of 56 in total

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