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S21_scaffold_123_curated

Search features with annotation key words

Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S21_scaffold_123_curated_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..113)
DNA (111bp) protein (37aa)
Transposase n=8 Tax=Pseudomonas aeruginosa RepID=I6RLW3_PSEAI
transposase
ATPase AAA {ECO:0000313|EMBL:KFF35012.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA01.;"
S21_scaffold_123_curated_2
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(631..1191)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0ECF8_PSEDT rbh
Uncharacterized protein {ECO:0000313|EMBL:EGB95905.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein rbh
S21_scaffold_123_curated_3
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1419..2408
DNA (990bp) protein (330aa)
Sodium:bile acid symporter family protein n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VH29_PSEU5 rbh
sodium:bile acid symporter family protein rbh
Sodium:bile acid symporter family protein {ECO:0000313|EMBL:ABP78280.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_123_curated_4
unknown

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comp(3076..3204)
DNA (129bp) protein (43aa)

This feature has no annotations

S21_scaffold_123_curated_5
Pseudomonas alkylphenolia, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6050..6331
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Pseudomonas sp. S9 RepID=UPI0002556FDF
Pyocin activator protein PrtN
Pyocin activator protein PrtN {ECO:0000313|EMBL:AIL60896.1}; TaxID=237609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alkylphenolia.;"
S21_scaffold_123_curated_6
Pseudomonas alkylphenolia, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6328..7440)
DNA (1113bp) protein (371aa)
phage integrase family site-specific recombinase, partial n=1 Tax=Pseudomonas sp. S9 RepID=UPI0002556FDE rbh
phage integrase family site-specific recombinase
Phage integrase family site-specific recombinase {ECO:0000313|EMBL:AIL60895.1}; TaxID=237609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alkylphenolia.;"
S21_scaffold_123_curated_7
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

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7614..8552
DNA (939bp) protein (313aa)
tRNA-dihydrouridine synthase A n=1 Tax=Pseudomonas stutzeri RepID=UPI00036916EE rbh
tRNA-dihydrouridine synthase A rbh
Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
S21_scaffold_123_curated_8
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8684..9610
DNA (927bp) protein (309aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155};; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
transaldolase n=1 Tax=Pseudomonas stutzeri RepID=UPI000316C930 rbh
tal; transaldolase B rbh
S21_scaffold_123_curated_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9618..10100)
DNA (483bp) protein (161aa)
Anti-anti-sigma factor, putative n=4 Tax=Pseudomonas stutzeri RepID=A4VK42_PSEU5 rbh
anti-anti-sigma factor rbh
Anti-anti-sigma factor, putative {ECO:0000313|EMBL:AEJ04850.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
S21_scaffold_123_curated_10
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10097..11281)
DNA (1185bp) protein (395aa)
Two-component response regulator n=3 Tax=Pseudomonas stutzeri RepID=F8H6A3_PSEUT rbh
two-component response regulator rbh
Probable two-component response regulator {ECO:0000313|EMBL:ABP79342.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_123_curated_11
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11475..11774
DNA (300bp) protein (100aa)
Uncharacterized protein n=3 Tax=Pseudomonas stutzeri RepID=F2N063_PSEU6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ04848.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
S21_scaffold_123_curated_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11821..12522)
DNA (702bp) protein (234aa)
VacJ family lipoprotein n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6KWY0_PSEST rbh
VacJ family lipoprotein {ECO:0000313|EMBL:EPL60861.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
vacJ; VacJ-like lipoprotein rbh
S21_scaffold_123_curated_13
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12737..13003
DNA (267bp) protein (89aa)
Chromosome segregation ATPase n=3 Tax=Pseudomonas stutzeri RepID=F2N061_PSEU6
chromosome segregation ATPase
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA83586.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_123_curated_14
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13040..13870)
DNA (831bp) protein (277aa)
7-cyano-7-deazaguanine reductase n=1 Tax=Pseudomonas stutzeri RepID=UPI0002D5EE02 rbh
queF; 7-cyano-7-deazaguanine reductase rbh
Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
S21_scaffold_123_curated_15
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13963..14742)
DNA (780bp) protein (260aa)
ABC transporter, permease protein n=3 Tax=Pseudomonas stutzeri RepID=A4VK36_PSEU5 rbh
ABC transporter permease rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_123_curated_16
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14739..15668)
DNA (930bp) protein (310aa)
ABC transporter ATP-binding protein n=3 Tax=Pseudomonas stutzeri RepID=F2N058_PSEU6 rbh
yadG; ABC transporter ATP-binding protein rbh
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA83583.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_123_curated_17
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15754..16752)
DNA (999bp) protein (333aa)
Succinylglutamate desuccinylase {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036677}; EC=3.5.1.96 {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036667};; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
succinylglutamate desuccinylase n=1 Tax=Pseudomonas stutzeri RepID=UPI000311996A rbh
astE; succinylglutamate desuccinylase rbh
S21_scaffold_123_curated_18
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16765..17046)
DNA (282bp) protein (94aa)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit n=4 Tax=Pseudomonas stutzeri RepID=A4VK33_PSEU5
type IIA topoisomerase
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA83581.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_123_curated_19
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17103..18323)
DNA (1221bp) protein (407aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (EC:2.6.1.11 2.6.1.17) rbh
succinyldiaminopimelate aminotransferase n=1 Tax=Pseudomonas stutzeri RepID=UPI0002F0D481 rbh
S21_scaffold_123_curated_20
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18465..19154)
DNA (690bp) protein (230aa)
Enoyl-CoA hydratase n=3 Tax=Pseudomonas stutzeri RepID=F2N054_PSEU6 rbh
enoyl-CoA hydratase rbh
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA83579.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_123_curated_21
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19283..20569)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=2 Tax=Pseudomonas stutzeri RepID=A4VK30_PSEU5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABP79331.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_123_curated_trna_1
unknown

Not on your lists

20772..20858
DNA (87bp)
transferRNA Ser
S21_scaffold_123_curated_22
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21050..21478
DNA (429bp) protein (143aa)
calpastatin n=1 Tax=Pseudomonas stutzeri RepID=UPI0002F77EB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPL60871.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
S21_scaffold_123_curated_23
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21500..22012)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Pseudomonas stutzeri RepID=UPI0002ED9CBE rbh
hypothetical protein rbh
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA83576.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_123_curated_24
unknown

Not on your lists

22242..22337
DNA (96bp) protein (32aa)

This feature has no annotations

S21_scaffold_123_curated_25
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22372..22728
DNA (357bp) protein (119aa)
Rhodanese domain-containing protein n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2N049_PSEU6
rhodanese domain-containing protein
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA83574.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_123_curated_26
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22856..23995
DNA (1140bp) protein (380aa)
Uncharacterized protein n=3 Tax=Pseudomonas stutzeri RepID=F2N048_PSEU6 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EPL60875.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
S21_scaffold_123_curated_27
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24108..26552
DNA (2445bp) protein (815aa)
Acyl-CoA dehydrogenase n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2N047_PSEU6 rbh
FadE protein {ECO:0000313|EMBL:AEA83572.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
fadE; acyl-CoA dehydrogenase rbh
S21_scaffold_123_curated_28
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26677..28278)
DNA (1602bp) protein (534aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
Sensor histidine kinase n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JS61_PSEST rbh
sensor histidine kinase rbh
S21_scaffold_123_curated_29
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28290..29006)
DNA (717bp) protein (239aa)
Two-component response regulator n=4 Tax=Pseudomonas stutzeri RepID=F2N045_PSEU6 rbh
two-component response regulator rbh
Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
Displaying items 1-30 of 114 in total

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