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S21_scaffold_275_curated

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S21_scaffold_275_curated_1
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..591
DNA (591bp) protein (197aa)
2-alkenal reductase n=14 Tax=Proteobacteria RepID=C6BDI4_RALP1
2-alkenal reductase
PDZ domain protein {ECO:0000313|EMBL:KIN92414.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
S21_scaffold_275_curated_2
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

825..1733
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=19 Tax=Proteobacteria RepID=C6BDI3_RALP1 rbh
D-alanyl-D-alanine endopeptidase
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:AJW44584.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
S21_scaffold_275_curated_3
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2140..2538)
DNA (399bp) protein (133aa)
4-carboxymuconolactone decarboxylase n=2 Tax=Pseudomonas stutzeri RepID=A4VJ03_PSEU5
pcaC; 4-carboxymuconolactone decarboxylase
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ABP78954.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_275_curated_4
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2634..3422)
DNA (789bp) protein (263aa)
Beta-ketoadipate enol-lactone hydrolase n=2 Tax=Pseudomonas stutzeri RepID=A4VJ02_PSEU5 rbh
pcaD; beta-ketoadipate enol-lactone hydrolase rbh
Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
S21_scaffold_275_curated_5
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3431..4792)
DNA (1362bp) protein (454aa)
pcaB; 3-carboxy-cis,cis-muconate cycloisomerase (EC:5.5.1.2) rbh
3-carboxy-cis,cis-muconate cycloisomerase n=2 Tax=Pseudomonas stutzeri RepID=A4VJ01_PSEU5 rbh
3-carboxy-cis,cis-muconate cycloisomerase {ECO:0000313|EMBL:ABP78952.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_275_curated_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5015..6220)
DNA (1206bp) protein (402aa)
Beta-ketoadipyl CoA thiolase PcaF n=2 Tax=Pseudomonas stutzeri RepID=A4VJ00_PSEU5 rbh
pcaF; beta-ketoadipyl CoA thiolase rbh
Beta-ketoadipyl CoA thiolase PcaF {ECO:0000313|EMBL:ABP78951.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_275_curated_7
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6217..6999)
DNA (783bp) protein (261aa)
3-oxoadipate:succinyl-CoA transferase, subunit B n=4 Tax=Pseudomonas stutzeri RepID=A4VIZ9_PSEU5 rbh
pcaJ; 3-oxoadipate:succinyl-CoA transferase subunit B rbh
PcaJ protein {ECO:0000313|EMBL:AEA83129.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_275_curated_8
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6999..7856)
DNA (858bp) protein (286aa)
3-oxoadipate:succinyl-CoA transferase, subunit A n=2 Tax=Pseudomonas stutzeri RepID=A4VIZ8_PSEU5 rbh
pcaI; 3-oxoadipate:succinyl-CoA transferase subunit A rbh
3-oxoadipate:succinyl-CoA transferase subunit A {ECO:0000313|EMBL:EPL60952.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
S21_scaffold_275_curated_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8048..8890)
DNA (843bp) protein (281aa)
IclR family transcriptional regulator n=1 Tax=Pseudomonas stutzeri RepID=UPI00036BA568 rbh
pcaR; transcriptional regulator PcaR rbh
Transcriptional regulator PcaR {ECO:0000313|EMBL:ABP78948.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_275_curated_10
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8959..9888)
DNA (930bp) protein (310aa)
Permease n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2MX23_PSEU6 rbh
permease rbh
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA83126.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_275_curated_11
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9899..10993)
DNA (1095bp) protein (365aa)
ATPase n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2MX22_PSEU6 rbh
ATPase rbh
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA83125.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_275_curated_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10983..11588)
DNA (606bp) protein (202aa)
Protocatechuate 3,4-dioxygenase, alpha subunit n=2 Tax=Pseudomonas stutzeri RepID=A4VIZ4_PSEU5 rbh
pcaG; protocatechuate 3,4-dioxygenase subunit alpha rbh
Protocatechuate 3,4-dioxygenase subunit alpha {ECO:0000313|EMBL:EPL60948.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
S21_scaffold_275_curated_13
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11601..12320)
DNA (720bp) protein (240aa)
Protocatechuate 3,4-dioxygenase, beta subunit n=2 Tax=Pseudomonas stutzeri RepID=A4VIZ3_PSEU5 rbh
pcaH; protocatechuate 3,4-dioxygenase subunit beta rbh
Protocatechuate 3,4-dioxygenase, beta subunit {ECO:0000313|EMBL:ABP78944.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_275_curated_14
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12431..13345)
DNA (915bp) protein (305aa)
Pca operon transcriptional activator PcaQ n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2MX19_PSEU6 rbh
pcaQ; pca operon transcriptional activator PcaQ rbh
PcaQ protein {ECO:0000313|EMBL:AEA83122.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_275_curated_15
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13482..14297
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221) RepID=F8H1U7_PSEUT rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
S21_scaffold_275_curated_16
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14462..14611)
DNA (150bp) protein (50aa)
Sodium/proline symporter PutP n=1 Tax=Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221) RepID=F8H1U6_PSEUT
putP-1; sodium/proline symporter PutP
PutP-2 protein {ECO:0000313|EMBL:AEA83120.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
Displaying 16 items

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