ggKbase home page

S21_scaffold_175_curated

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S21_scaffold_175_curated_1
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..151
DNA (150bp) protein (50aa)
alkyl hydroperoxide reductase, partial n=1 Tax=Pseudomonas stutzeri RepID=UPI0002F473CE
ahpF; alkyl hydroperoxide reductase subunit F
Alkyl hydroperoxide reductase subunit F {ECO:0000313|EMBL:EWC42333.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri KOS6.;"
S21_scaffold_175_curated_2
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

361..1506
DNA (1146bp) protein (382aa)
Biotin carboxylase n=2 Tax=Pseudomonas stutzeri RepID=S6JQ52_PSEST rbh
Biotin carboxylase {ECO:0000313|EMBL:EPL60117.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
biotin carboxylase rbh
S21_scaffold_175_curated_3
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1493..2284
DNA (792bp) protein (264aa)
Prolyl oligopeptidase family protein n=2 Tax=Pseudomonas stutzeri RepID=F8HA87_PSEUT rbh
prolyl oligopeptidase family protein rbh
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:EPL60118.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
S21_scaffold_175_curated_4
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2301..3329)
DNA (1029bp) protein (343aa)
Preprotein translocase subunit SecA n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JK67_PSEST rbh
Preprotein translocase subunit SecA {ECO:0000313|EMBL:EPL60119.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
preprotein translocase subunit SecA rbh
S21_scaffold_175_curated_5
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3322..3912)
DNA (591bp) protein (197aa)
ATP--cobalamin adenosyltransferase n=1 Tax=Pseudomonas stutzeri RepID=UPI0002F97892 rbh
ATP:cob(I)alamin adenosyltransferase rbh
ATP:cob(I)alamin adenosyltransferase, putative {ECO:0000313|EMBL:AEJ06486.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
S21_scaffold_175_curated_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3926..5941)
DNA (2016bp) protein (672aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
sensor histidine kinase n=1 Tax=Pseudomonas stutzeri RepID=UPI00031A11D0 rbh
sensory box histidine kinase/response regulator rbh
S21_scaffold_175_curated_7
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5988..6899)
DNA (912bp) protein (304aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
2-dehydropantoate 2-reductase n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JQ54_PSEST rbh
panE-2; 2-dehydropantoate 2-reductase rbh
S21_scaffold_175_curated_8
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6904..7869)
DNA (966bp) protein (322aa)
Two-component response regulator n=2 Tax=Pseudomonas stutzeri RepID=F2N153_PSEU6 rbh
two-component response regulator rbh
Two-component response regulator {ECO:0000313|EMBL:EPL60123.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
S21_scaffold_175_curated_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8020..8499
DNA (480bp) protein (160aa)
UPF0234 protein PST_3153 n=4 Tax=Pseudomonas stutzeri RepID=Y3153_PSEU5 rbh
putative nucleotide-binding protein rbh
UPF0234 protein B382_22601 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
S21_scaffold_175_curated_10
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8590..9414
DNA (825bp) protein (275aa)
Mechanosensitive ion channel family protein n=3 Tax=Pseudomonas stutzeri RepID=A4VP89_PSEU5 rbh
mechanosensitive ion channel family protein rbh
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EPL60125.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
S21_scaffold_175_curated_11
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9464..11164)
DNA (1701bp) protein (567aa)
Muropeptide permease AmpG n=3 Tax=Pseudomonas stutzeri RepID=A4VP88_PSEU5 rbh
ampG; muropeptide permease AmpG rbh
AmpG protein {ECO:0000313|EMBL:AEA85186.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_175_curated_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11203..11613)
DNA (411bp) protein (137aa)
DNA base-flipping protein YbaZ n=1 Tax=Pseudomonas stutzeri RepID=UPI0002E3E411
putative 6-O-methylguanine DNA methyltransferase family protein
Methylated-DNA-(Protein)-cysteine S-methyltransferase {ECO:0000313|EMBL:AEJ06479.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
S21_scaffold_175_curated_13
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11698..12702
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2VM49_PSEST rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
S21_scaffold_175_curated_14
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12779..13537)
DNA (759bp) protein (253aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100) rbh
Probable short-chain dehydrogenase n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VP86_PSEU5 rbh
Probable short-chain dehydrogenase {ECO:0000313|EMBL:ABP80787.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_175_curated_15
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13638..14345
DNA (708bp) protein (236aa)
Putative heme iron utilization protein n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VP85_PSEU5 rbh
putative heme iron utilization protein rbh
Putative heme iron utilization protein {ECO:0000313|EMBL:ABP80786.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_175_curated_16
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14477..14935
DNA (459bp) protein (153aa)
Cytoplasmic membrane family protein n=2 Tax=Pseudomonas stutzeri RepID=A4VP84_PSEU5
fxsA; FxsA protein
Phage T7 F exclusion suppressor FxsA {ECO:0000313|EMBL:EPL60131.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
S21_scaffold_175_curated_17
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15184..15477
DNA (294bp) protein (98aa)
10 kDa chaperonin n=4 Tax=Pseudomonas stutzeri RepID=CH10_PSEU5
groES; co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
S21_scaffold_175_curated_18
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15525..17165
DNA (1641bp) protein (547aa)
60 kDa chaperonin n=4 Tax=Pseudomonas stutzeri RepID=CH60_PSEU5 rbh
60 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000255|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
groEL; chaperonin GroEL rbh
S21_scaffold_175_curated_19
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17323..17544
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Pseudomonas stutzeri RepID=A4VP81_PSEU5
hypothetical protein
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA85178.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_175_curated_20
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17556..20612)
DNA (3057bp) protein (1019aa)
Multidrug efflux protein n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2N141_PSEU6 rbh
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA85177.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
multidrug efflux protein rbh
S21_scaffold_175_curated_21
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20667..21800)
DNA (1134bp) protein (378aa)
RND efflux membrane fusion protein n=3 Tax=Pseudomonas stutzeri RepID=F2N140_PSEU6 rbh
RND efflux membrane fusion protein rbh
Probable RND efflux membrane fusion protein {ECO:0000313|EMBL:ABP80780.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_175_curated_22
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22023..23645)
DNA (1623bp) protein (541aa)
Methyl-accepting chemotaxis protein n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4QGB5_PSECO rbh
Chemotaxis protein {ECO:0000313|EMBL:KIZ38629.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
methyl-accepting chemotaxis protein rbh
S21_scaffold_175_curated_23
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23731..24825)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Pseudomonas stutzeri RepID=UPI0002DF8330 rbh
putative lipoprotein rbh
Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
S21_scaffold_175_curated_24
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24827..25963)
DNA (1137bp) protein (379aa)
Putative lipoprotein n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2N137_PSEU6 rbh
putative lipoprotein rbh
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA85173.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_175_curated_25
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25973..27391)
DNA (1419bp) protein (473aa)
Thiol oxidoreductase n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2N136_PSEU6 rbh
thiol oxidoreductase rbh
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA85172.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_175_curated_26
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27560..28894)
DNA (1335bp) protein (445aa)
Iron-regulated protein A, putative n=4 Tax=Pseudomonas stutzeri RepID=A4VP74_PSEU5 rbh
iron-regulated protein A rbh
Iron-regulated protein A, putative {ECO:0000313|EMBL:AEJ06465.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
S21_scaffold_175_curated_27
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29062..29634
DNA (573bp) protein (191aa)
LemA family protein n=2 Tax=Pseudomonas stutzeri RepID=A4VP73_PSEU5 rbh
LemA family protein rbh
LemA family protein {ECO:0000313|EMBL:ABP80774.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_175_curated_28
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29636..30529
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JHP5_PSEST rbh
Uncharacterized protein {ECO:0000313|EMBL:EPL60143.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
hypothetical protein rbh
S21_scaffold_175_curated_29
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30536..31219)
DNA (684bp) protein (228aa)
Spermidine synthase n=3 Tax=Pseudomonas stutzeri RepID=A4VP71_PSEU5 rbh
spermidine synthase rbh
Spermidine synthase {ECO:0000313|EMBL:ABP80772.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_175_curated_30
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31326..33374)
DNA (2049bp) protein (683aa)
Diguanylate cyclase n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6L3C8_PSEST rbh
Diguanylate cyclase {ECO:0000313|EMBL:EPL60145.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
diguanylate cyclase rbh
Displaying items 1-30 of 57 in total

View Taxonomy