name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S22_scaffold_54_curated_1
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..549)
|
VgrG protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=Q7CSZ6_AGRT5
rbh
vgrG; vgrG protein
rbh
VgrG protein {ECO:0000313|EMBL:AAK89755.2}; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium; tumefaciens (strain C58)).;"
|
|
S22_scaffold_54_curated_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1051..1716)
|
Uncharacterized protein {ECO:0000313|EMBL:KDR87642.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
|
|
S22_scaffold_54_curated_3
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2032..3378)
|
hypothetical protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI00035F5902
rbh
Uncharacterized protein {ECO:0000313|EMBL:KGD89192.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
rbh
|
|
S22_scaffold_54_curated_4
unknown
|
Not on your lists |
comp(3488..3787)
|
This feature has no annotations |
|
S22_scaffold_54_curated_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4004..4633)
|
chloramphenicol acetyltransferase n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI000360A293
rbh
Chloramphenicol acetyltransferase {ECO:0000313|EMBL:CDN94724.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
cat; chloramphenicol acetyltransferase
rbh
|
|
S22_scaffold_54_curated_6
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5022..5417
|
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5R6_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM40214.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
|
|
S22_scaffold_54_curated_7
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5787..6755)
|
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000381A0D8
rbh
Thiamine biosynthesis protein ApbE {ECO:0000313|EMBL:KGD96454.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
nosX; NosX accesory protein NosX
rbh
|
|
S22_scaffold_54_curated_8
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6742..7290)
|
NosL copper chaperone n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00035E07F2
NosL family protein
NosL family protein {ECO:0000313|EMBL:AFL52447.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
|
|
S22_scaffold_54_curated_9
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7287..8114)
|
Membrane protein NosY n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X992_RHIFR
rbh
nosY; membrane protein NosY
rbh
Membrane protein NosY {ECO:0000313|EMBL:AFL52448.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
|
|
S22_scaffold_54_curated_10
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8111..9031)
|
Copper transport ATP-binding protein NosF n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X993_RHIFR
rbh
nosF; copper transport ATP-binding protein NosF
rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGE79940.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
|
|
S22_scaffold_54_curated_11
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9028..10374)
|
Copper-binding periplasmic protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X994_RHIFR
rbh
nosD; copper-binding periplasmic protein
rbh
Copper-binding periplasmic protein {ECO:0000313|EMBL:AFL52450.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
|
|
S22_scaffold_54_curated_12
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10404..12317)
|
Nitrous-oxide reductase {ECO:0000256|HAMAP-Rule:MF_00716}; EC=1.7.2.4 {ECO:0000256|HAMAP-Rule:MF_00716};; N(2)OR {ECO:0000256|HAMAP-Rule:MF_00716}; N2O reductase {ECO:0000256|HAMAP-Rule:MF_00716}; Flags: Precursor;; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
nosZ; nitrous oxide reductase (EC:1.7.2.4)
Nitrous-oxide reductase n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X995_RHIFR
rbh
|
|
S22_scaffold_54_curated_13
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12341..14614)
|
Regulatory protein NosR n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X996_RHIFR
rbh
FMN-binding protein {ECO:0000313|EMBL:KGD96460.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
nosR; regulatory protein NosR
rbh
|
|
S22_scaffold_54_curated_14
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14792..15643
|
Uncharacterized protein n=2 Tax=Rhizobium meliloti RepID=Q92Z51_RHIME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK65299.2}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
|
|
S22_scaffold_54_curated_15
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15932..17701
|
GAF sensor-containing diguanylate cyclase n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HF02_RHIRD
rbh
Diguanylate cyclase {ECO:0000313|EMBL:KJF71159.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
diguanylate cyclase
|
|
S22_scaffold_54_curated_16
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17953..19161
|
Permease n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UEY9_RHIRD
rbh
Putative transporter, permease {ECO:0000313|EMBL:CDN94997.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
putative transporter, permease
rbh
|
|
S22_scaffold_54_curated_17
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19345..19812)
|
AsnC family transcriptional regulator n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UEZ4_RHIRD
AsnC family transcriptional regulator {ECO:0000313|EMBL:EGP54895.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
Uncharacterized HTH-type transcriptional regulator y4tD
|
|
S22_scaffold_54_curated_18
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19934..21412
|
gabD2; succinate semialdehyde dehydrogenase (EC:1.2.1.16)
rbh
Succinate semialdehyde dehydrogenase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UEZ5_RHIRD
rbh
Succinate semialdehyde dehydrogenase {ECO:0000313|EMBL:EGP54896.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
|
|
S22_scaffold_54_curated_19
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21427..22830
|
Uncharacterized aminotransferase y4uB (EC:2.6.1.-)
rbh
Uncharacterized aminotransferase y4uB n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QB25_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:KAJ36533.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
|
|
S22_scaffold_54_curated_20
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22999..24447
|
GntR family transcriptional regulator n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UEZ7_RHIRD
rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EGP54898.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
Transcriptional regulator with HTH domain and aminotransferase domain
rbh
|
|
S22_scaffold_54_curated_21
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24518..25537
|
Threonine dehydratase {ECO:0000313|EMBL:CDN94875.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CDN94875.1};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
putative threonine dehydratase (EC:4.3.1.19)
rbh
Putative threonine dehydratase n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q0Y3_9RHIZ
rbh
|
|
S22_scaffold_54_curated_22
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25534..26547
|
arcB; ectoine utilization protein EutC (EC:4.3.1.12)
rbh
Ornithine cyclodeaminase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UEZ9_RHIRD
rbh
Ornithine cyclodeaminase {ECO:0000313|EMBL:EGP54900.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
|
|
S22_scaffold_54_curated_23
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26544..27722
|
Uncharacterized hydrolase/peptidase y4tM (EC:3.-.-.-)
rbh
X-Pro dipeptidase n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI000371D64C
rbh
Xaa-Pro dipeptidase {ECO:0000313|EMBL:EMS97569.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
|
|
S22_scaffold_54_curated_24
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27727..28740
|
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8BE29_RHIRD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EMS97570.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
Ectoine utilization protein EutE
rbh
|
|
S22_scaffold_54_curated_25
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28802..29653
|
Putative amino-acid ABC transporter periplasmic-binding protein y4tE n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q0P6_9RHIZ
rbh
putative amino-acid ABC transporter periplasmic-binding protein y4tE
rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KAJ36541.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
|
|
S22_scaffold_54_curated_26
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29714..30379
|
ABC transporter, membrane spanning protein (Amino acid) n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HC18_RHIRD
rbh
ABC transporter, membrane spanning protein (Amino acid) {ECO:0000313|EMBL:EHJ97329.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
amino acid ABC transporter permease
|
|
S22_scaffold_54_curated_27
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30392..31084
|
Putative amino-acid ABC transporter permease protein y4tG n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q4D2_9RHIZ
rbh
putative amino-acid ABC transporter permease protein y4tG
rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:KGE83112.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
|
|
S22_scaffold_54_curated_28
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31081..31860
|
Amino acid ABC transporter nucleotide binding/ATPase protein n=2 Tax=Rhizobium RepID=K5CX30_RHILU
rbh
putative amino acid transport protein, ATP-binding protein
rbh
Putative amino acid transport protein, ATP-binding protein {ECO:0000313|EMBL:CDI10882.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
|
|
S22_scaffold_54_curated_29
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31894..32802)
|
UPI0003D044FA related cluster n=1 Tax=unknown RepID=UPI0003D044FA
rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ESZ22260.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
LysR family transcriptional regulator
rbh
|
|
S22_scaffold_54_curated_30
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32920..33642
|
PREDICTED: dehydrogenase/reductase SDR family member 11-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1A7F6
rbh
short-chain dehydrogenase/reductase SDR
rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADH89334.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
|