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S22_scaffold_299_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S22_scaffold_299_curated_1
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..146
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UM97_SINMW
Transposase {ECO:0000313|EMBL:KGE79625.1}; Flags: Fragment;; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein
S22_scaffold_299_curated_2
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143..544)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B35BBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGE80128.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
S22_scaffold_299_curated_3
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

647..997
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CEB5_9RHIZ
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KGE80129.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
S22_scaffold_299_curated_4
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1341..2348
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00036AFCB1 rbh
sensory box protein
Histidine kinase {ECO:0000313|EMBL:ESY76949.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
S22_scaffold_299_curated_5
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2441..3478
DNA (1038bp) protein (346aa)
regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00037E1FC2 rbh
sensory box protein
Regulator {ECO:0000313|EMBL:KGE80130.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
S22_scaffold_299_curated_6
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3535..3783)
DNA (249bp) protein (83aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGE80131.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
S22_scaffold_299_curated_7
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3837..4127)
DNA (291bp) protein (97aa)
Bsl8315 protein
Bsl8315 protein {ECO:0000313|EMBL:CDN46562.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
S22_scaffold_299_curated_8
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4380..7616
DNA (3237bp) protein (1079aa)
Two component sensor kinase/response regulator hybrid n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K3D7_AGRVS rbh
Two component sensor kinase/response regulator hybrid {ECO:0000313|EMBL:ACM39385.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
cvgS; two component sensor kinase/response regulator hybrid rbh
S22_scaffold_299_curated_9
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7623..7835)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2KM05_9RHIZ
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN50451.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
S22_scaffold_299_curated_10
Ochrobactrum sp. SJY1, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8033..8275
DNA (243bp) protein (81aa)
Transposase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K3C7_AGRVS
transposase family protein
Mobile element protein {ECO:0000313|EMBL:AIH15817.1}; TaxID=1526653 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. SJY1.;"
S22_scaffold_299_curated_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8298..9275
DNA (978bp) protein (326aa)
Helix-turn-helix, Fis-type n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXT7_9RHIZ rbh
Helix-turn-helix, Fis-type {ECO:0000313|EMBL:EYR79379.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Fis family transcriptional regulator rbh
S22_scaffold_299_curated_12

Not on your lists

9351..9986
DNA (636bp) protein (212aa)
Transposase n=1 Tax=uncultured bacterium RepID=E8PRN2_9BACT
Transposase {ECO:0000313|EMBL:ADU90787.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
tn3 transposase DDE domain protein
S22_scaffold_299_curated_13

Not on your lists

10058..10414
DNA (357bp) protein (119aa)
Transposase n=1 Tax=uncultured bacterium RepID=E8PRN2_9BACT
Transposase {ECO:0000313|EMBL:ADU90787.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
tn3 transposase DDE domain protein
S22_scaffold_299_curated_14
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12163..14091)
DNA (1929bp) protein (643aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
macrolide export ATP-binding/permease macB (EC:3.6.3.-) rbh
ABC transporter n=1 Tax=Rhizobium radiobacter RepID=UPI0003787A89 rbh
S22_scaffold_299_curated_15
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14124..15341)
DNA (1218bp) protein (406aa)
Acriflavine resistance protein E n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8B898_RHIRD rbh
Acriflavine resistance protein E {ECO:0000313|EMBL:EMS99131.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
macA; membrane fusion protein, macrolide-specific efflux system
S22_scaffold_299_curated_16
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15370..15666)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LAF6_AGRSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK02959.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;"
S22_scaffold_299_curated_17
Agrobacterium sp. H13-3, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15793..16443)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LAF7_AGRSH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADY66269.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;"
S22_scaffold_299_curated_18
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16647..17378
DNA (732bp) protein (244aa)
Two component transcriptional regulator n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8A6W0_RHIRD rbh
Two component transcriptional regulator {ECO:0000313|EMBL:EMS96669.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
transcriptional regulator
S22_scaffold_299_curated_19
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17375..18712
DNA (1338bp) protein (446aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XSM0_RHIRD rbh
sensor histidine kinase
Displaying 19 items

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