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S22_scaffold_117_curated

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S22_scaffold_117_curated_1
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184..750)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2Z944_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD57975.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
S22_scaffold_117_curated_2
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

960..1460
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IFC1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB10365.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
S22_scaffold_117_curated_3
unknown

Not on your lists

comp(1932..2144)
DNA (213bp) protein (71aa)

This feature has no annotations

S22_scaffold_117_curated_4
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2244..3209)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZA90_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD57977.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein rbh
S22_scaffold_117_curated_5
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3206..4279)
DNA (1074bp) protein (358aa)
Putative metal chaperone n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3ATB9_9CAUL rbh
Putative metal chaperone {ECO:0000313|EMBL:GAD57978.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
cobalamin synthesis protein P47K rbh
S22_scaffold_117_curated_6
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4322..5242)
DNA (921bp) protein (307aa)
Cobalt-zinc-cadmium resistance protein CzcD n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AJY4_9CAUL rbh
Cobalt-zinc-cadmium resistance protein CzcD {ECO:0000313|EMBL:GAD57979.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
cation diffusion facilitator family transporter rbh
S22_scaffold_117_curated_7
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5252..5914)
DNA (663bp) protein (221aa)
Expressed protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2Z949_9CAUL rbh
Expressed protein {ECO:0000313|EMBL:GAD57980.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein
S22_scaffold_117_curated_8
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6061..6912
DNA (852bp) protein (284aa)
Voltage-gated sodium channel subunit n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2YRB6_9CAUL rbh
Voltage-gated sodium channel subunit {ECO:0000313|EMBL:GAD57981.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
Ion transport protein rbh
S22_scaffold_117_curated_9
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6914..7489)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZA94_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD57982.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein
S22_scaffold_117_curated_10
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7715..8302
DNA (588bp) protein (196aa)
50S ribosomal protein L21 n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3ATC3_9CAUL rbh
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
rplU; 50S ribosomal protein L21
S22_scaffold_117_curated_11
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8412..8687
DNA (276bp) protein (92aa)
50S ribosomal protein L27 n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AJY5_9CAUL
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
50S ribosomal protein L27
S22_scaffold_117_curated_12
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8859..9392
DNA (534bp) protein (178aa)
50S ribosomal protein acetyltransferase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2Z954_9CAUL rbh
50S ribosomal protein acetyltransferase {ECO:0000313|EMBL:GAD57985.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
GCN5-like N-acetyltransferase
S22_scaffold_117_curated_13
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9481..10356
DNA (876bp) protein (292aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2YRB9_9CAUL rbh
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase rbh
S22_scaffold_117_curated_14
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10356..10772
DNA (417bp) protein (139aa)
UPF0102 protein MBE-BAB_0237 n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZA98_9CAUL
UPF0102 protein MBEBAB_0237 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein
S22_scaffold_117_curated_15
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10780..11595
DNA (816bp) protein (272aa)
Protein sirB1 n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3ATC8_9CAUL rbh
Protein sirB1 {ECO:0000313|EMBL:GAD57988.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein rbh
S22_scaffold_117_curated_16
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11669..12610
DNA (942bp) protein (314aa)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00162}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
glutathione synthetase (EC:6.3.2.3) rbh
Glutathione synthetase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AJZ0_9CAUL rbh
S22_scaffold_117_curated_17
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12679..13662
DNA (984bp) protein (328aa)
MG(2+) chelatase family protein / comM-related protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2Z959_9CAUL rbh
MG(2+) chelatase family protein / comM-related protein {ECO:0000313|EMBL:GAD57990.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
Mg chelatase subunit ChlI rbh
S22_scaffold_117_curated_18
unknown

Not on your lists

comp(13633..14778)
DNA (1146bp) protein (382aa)

This feature has no annotations

S22_scaffold_117_curated_19
unknown

Not on your lists

14832..15485
DNA (654bp) protein (218aa)

This feature has no annotations

S22_scaffold_117_curated_20
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15379..16377)
DNA (999bp) protein (333aa)
Transposase n=1 Tax=Caulobacter sp. AP07 RepID=J2GPI7_9CAUL rbh
Transposase {ECO:0000313|EMBL:EJL32220.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
putative transposase rbh
S22_scaffold_117_curated_21
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16551..16886
DNA (336bp) protein (112aa)
GMP synthase, PP-ATPase domain/subunit n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZB11_9CAUL
GMP synthase, PP-ATPase domain/subunit {ECO:0000313|EMBL:GAD58665.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein
S22_scaffold_117_curated_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17021..17617
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUL9_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP69881.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
hypothetical protein
S22_scaffold_117_curated_23
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17602..17910)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VQD3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN08387.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
S22_scaffold_117_curated_24
unknown

Not on your lists

18448..18696
DNA (249bp) protein (83aa)

This feature has no annotations

S22_scaffold_117_curated_25
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19033..19182)
DNA (150bp) protein (50aa)
Putative transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J2PWQ7_9CAUL
Putative transcriptional regulator {ECO:0000313|EMBL:EJL32222.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
XRE family transcriptional regulator
S22_scaffold_117_curated_26
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19309..19680
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7Z907_9XANT
Uncharacterized protein {ECO:0000313|EMBL:ETC84542.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;"
S22_scaffold_117_curated_27
unknown

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comp(20092..20415)
DNA (324bp) protein (108aa)

This feature has no annotations

S22_scaffold_117_curated_28
unknown

Not on your lists

comp(20550..20753)
DNA (204bp) protein (68aa)

This feature has no annotations

S22_scaffold_117_curated_29
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20750..21190)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGS9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY27183.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
S22_scaffold_117_curated_30
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21253..21918
DNA (666bp) protein (222aa)
MG(2+) chelatase family protein / comM-related protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2Z959_9CAUL
MG(2+) chelatase family protein / comM-related protein {ECO:0000313|EMBL:GAD57990.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
Mg chelatase subunit ChlI
Displaying items 1-30 of 111 in total

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