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S22_scaffold_11_curated

Search features with annotation key words

Displaying items 1-30 of 523 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S22_scaffold_11_curated_1
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143..919)
DNA (777bp) protein (259aa)
Glycosyl transferase n=1 Tax=Asticcacaulis sp. AC460 RepID=V4PWG9_9CAUL rbh
Glycosyl transferase {ECO:0000313|EMBL:ESQ92706.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC460.;"
WecB/TagA/CpsF family glycosyl transferase
S22_scaffold_11_curated_2
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1087..2391
DNA (1305bp) protein (435aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22) rbh
Nucleotide sugar dehydrogenase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QS29_BREDI rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S22_scaffold_11_curated_3
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2396..3688)
DNA (1293bp) protein (431aa)
Transporter, major facilitator family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W781_9CAUL rbh
hypothetical protein rbh
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
S22_scaffold_11_curated_4
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3685..4161)
DNA (477bp) protein (159aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QL87_BRESC
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADK99942.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
S22_scaffold_11_curated_5
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4204..5352
DNA (1149bp) protein (383aa)
succinyl-diaminopimelate desuccinylase n=1 Tax=alpha proteobacterium L41A RepID=UPI00037633C0 rbh
succinyl-diaminopimelate desuccinylase rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S22_scaffold_11_curated_6
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5371..6510)
DNA (1140bp) protein (380aa)
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EDX82207.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EDX82207.1};; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W679_9CAUL rbh
oxygen-independent coproporphyrinogen III oxidase rbh
S22_scaffold_11_curated_7
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6503..7105)
DNA (603bp) protein (201aa)
xanthosine triphosphate pyrophosphatase (EC:3.6.1.-) rbh
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Caulobacter crescentus (strain NA1000 / CB15N) RepID=B8GXN6_CAUCN rbh
S22_scaffold_11_curated_8
unknown

Not on your lists

7326..7442
DNA (117bp) protein (39aa)

This feature has no annotations

S22_scaffold_11_curated_9
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7571..8149
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W676_9CAUL
hypothetical protein
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
S22_scaffold_11_curated_10
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8175..8423
DNA (249bp) protein (83aa)
Cro/Cl family transcriptional regulator n=1 Tax=alpha proteobacterium L41A RepID=UPI000370E0FA
XRE family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S22_scaffold_11_curated_11
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8427..8972
DNA (546bp) protein (182aa)
Smr domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W674_9CAUL
Smr protein/MutS2
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S22_scaffold_11_curated_12
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8956..9531)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WFB0_9CAUL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EDX79779.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
S22_scaffold_11_curated_13
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9596..10045)
DNA (450bp) protein (150aa)
UPF0178 protein Bresu_0172 n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QII4_BRESC
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S22_scaffold_11_curated_14
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10375..11127
DNA (753bp) protein (251aa)
short-chain dehydrogenase n=1 Tax=Pseudoclavibacter faecalis RepID=UPI0003679D81 rbh
Short chain dehydrogenase family protein {ECO:0000313|EMBL:CCQ44939.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
butA; short chain dehydrogenase/reductase family oxidoreductase rbh
S22_scaffold_11_curated_15
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11138..11854)
DNA (717bp) protein (239aa)
Rhomboid family protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C1E9_9SPHN
rhomboid family protein
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S22_scaffold_11_curated_16
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12111..14345)
DNA (2235bp) protein (745aa)
TonB-dependent receptor, putative n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZH95_9CAUL rbh
TonB-dependent receptor, putative {ECO:0000313|EMBL:GAD60497.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
TonB-dependent receptor plug rbh
S22_scaffold_11_curated_17
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14532..14750)
DNA (219bp) protein (73aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
S22_scaffold_11_curated_18
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15075..15290
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00035F49EA
Uncharacterized protein {ECO:0000313|EMBL:EKY25200.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
S22_scaffold_11_curated_19
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15680..16591
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HDI3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ56278.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein
S22_scaffold_11_curated_20
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16677..19265)
DNA (2589bp) protein (863aa)
ClpB protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZGA1_9CAUL rbh
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
ATP-dependent chaperone ClpB rbh
S22_scaffold_11_curated_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19515..21392
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5P0_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38233.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
S22_scaffold_11_curated_22
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21449..23353
DNA (1905bp) protein (635aa)
High-affinity choline uptake protein BetT n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2YYA8_9CAUL rbh
High-affinity choline uptake protein BetT {ECO:0000313|EMBL:GAD60501.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
choline/carnitine/betaine transporter rbh
S22_scaffold_11_curated_23
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23358..23987
DNA (630bp) protein (210aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QJ67_BRESC
lysine exporter LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ADK99591.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
S22_scaffold_11_curated_24
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24048..25682
DNA (1635bp) protein (545aa)
Beta-lactamase n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QJ69_BRESC rbh
beta-lactamase rbh
Beta-lactamase {ECO:0000313|EMBL:ADK99593.1}; Flags: Precursor;; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
S22_scaffold_11_curated_25
unknown

Not on your lists

comp(25761..26114)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000369FFA1
S22_scaffold_11_curated_26
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26224..27150)
DNA (927bp) protein (309aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ornithine carbamoyltransferase (EC:2.1.3.3) rbh
Ornithine carbamoyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYF2_BREDI rbh
S22_scaffold_11_curated_27
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27334..28524)
DNA (1191bp) protein (397aa)
Acetylornithine aminotransferase n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QG89_BRESC rbh
acetylornithine and succinylornithine aminotransferase rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S22_scaffold_11_curated_28
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28817..31750)
DNA (2934bp) protein (978aa)
DNA polymerase I (EC:2.7.7.7) rbh
DNA polymerase I n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2YY93_9CAUL rbh
DNA polymerase I {ECO:0000313|EMBL:GAD60486.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
S22_scaffold_11_curated_29
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31818..32588
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZG86_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD60485.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein rbh
S22_scaffold_11_curated_30
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32665..32838)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AS05_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAD60484.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein
Displaying items 1-30 of 523 in total

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