name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S22_scaffold_123_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..175)
|
Putative uncharacterized protein n=1 Tax=Rhodospirillum rubrum F11 RepID=G2TF09_RHORU
hypothetical protein
IS298 transposase OrfA {ECO:0000313|EMBL:EYR79798.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
S22_scaffold_123_curated_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(230..1039)
|
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDR4_XANP2
NAD-binding 3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase NAD-binding {ECO:0000313|EMBL:ABS66157.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
S22_scaffold_123_curated_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1397..2413)
|
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDR4_XANP2
NAD-binding 3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase NAD-binding {ECO:0000313|EMBL:ABS66157.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
S22_scaffold_123_curated_4
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2416..3624)
|
Beta-ketoadipyl CoA thiolase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDR3_XANP2
beta-ketoadipyl CoA thiolase
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:ABS66156.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
S22_scaffold_123_curated_5
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3658..4809)
|
acd3; acyl-CoA dehydrogenase (EC:1.3.99.3)
rbh
acyl-CoA dehydrogenase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00036A7E20
rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KER67923.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
|
|
S22_scaffold_123_curated_6
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5092..7209
|
6-carboxyhexanoate--CoA ligase n=1 Tax=Pseudomonas sp. 313 RepID=UPI000307BF91
6-carboxyhexanoate--CoA ligase {ECO:0000313|EMBL:KGD90483.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
pimeloyl-CoA synthetase
rbh
|
|
S22_scaffold_123_curated_7
Citreicella sp. 357, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7206..8147
|
Putative coenzyme A transferase, subunit A n=1 Tax=Citreicella sp. 357 RepID=I1AX07_9RHOB
rbh
Putative coenzyme A transferase, subunit A {ECO:0000313|EMBL:EIE51028.1}; TaxID=766499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. 357.;"
coenzyme A transferase family protein
|
|
S22_scaffold_123_curated_8
Citreicella sp. 357, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8144..8908
|
Coenzyme A transferase n=1 Tax=Citreicella sp. 357 RepID=I1AX08_9RHOB
rbh
Coenzyme A transferase {ECO:0000313|EMBL:EIE51029.1}; TaxID=766499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. 357.;"
coenzyme A transferase family protein
|
|
S22_scaffold_123_curated_9 |
Not on your lists |
comp(8922..9716)
|
Enoyl-CoA hydratase/isomerase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZK6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN87811.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
enoyl-CoA hydratase/isomerase
|
|
S22_scaffold_123_curated_10
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9706..10620)
|
Transcriptional regulator n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C711_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AKF84645.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
pcaR; transcriptional regulator
|
|
S22_scaffold_123_curated_11
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10628..11425)
|
Transcriptional regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZBL3_9PROT
Transcriptional regulator {ECO:0000313|EMBL:EME71830.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
transcriptional regulator
|
|
S22_scaffold_123_curated_12
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11553..12335)
|
Enoyl-CoA hydratase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZA5_9BURK
rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:EHL22279.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
Enoyl-CoA hydratase
|
|
S22_scaffold_123_curated_13
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12566..13564
|
Immunogenic protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZQ5_9RHOB
rbh
Immunogenic protein {ECO:0000313|EMBL:EAQ02536.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
TRAP transporter solute receptor, TAXI family
|
|
S22_scaffold_123_curated_14
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13597..15555
|
TRAP transporter, 4TM/12TM fusion protein n=1 Tax=Citreicella sp. 357 RepID=I1AX10_9RHOB
rbh
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KEJ94396.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudonitzschiae.;"
TRAP transporter, 4TM/12TM fusion protein
|
|
S22_scaffold_123_curated_15
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15819..16937)
|
oxidoreductase n=1 Tax=Variovorax paradoxus RepID=UPI00035F5221
rbh
NADH:flavin oxidoreductase / NADH oxidase
NADH:flavin oxidoreductase / NADH oxidase {ECO:0000313|EMBL:AIB15915.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
|
|
S22_scaffold_123_curated_16
Citreicella sp. 357, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16939..18087)
|
butyryl-CoA dehydrogenase (EC:1.3.8.1)
rbh
Acyl-CoA dehydrogenase-like protein n=1 Tax=Citreicella sp. 357 RepID=I1AX14_9RHOB
rbh
Acyl-CoA dehydrogenase-like protein {ECO:0000313|EMBL:EIE51035.1}; TaxID=766499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. 357.;"
|
|
S22_scaffold_123_curated_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18084..18569)
|
MaoC domain protein dehydratase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6D7_ALIDK
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:AEB84246.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
S22_scaffold_123_curated_18
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18592..19371)
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000365FE33
5-methyltetrahydrofolate-homocysteine methyltransferase {ECO:0000313|EMBL:ERF86591.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
Enoyl-CoA hydratase
|
|
S22_scaffold_123_curated_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19634..20998
|
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6E7_ALIDK
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB84256.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
S22_scaffold_123_curated_20
uncultured bacterium, Bacteria
|
Not on your lists |
21002..21334
|
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DX26_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98378.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
|
|
S22_scaffold_123_curated_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21337..22950
|
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4)
rbh
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:AEB84254.1}; EC=6.4.1.4 {ECO:0000313|EMBL:AEB84254.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
methylcrotonoyl-CoA carboxylase n=1 Tax=Actinomadura atramentaria RepID=UPI0003754FBB
rbh
|
|
S22_scaffold_123_curated_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22953..24926
|
Methylcrotonoyl-CoA carboxylase, Pyruvate carboxylase {ECO:0000313|EMBL:AEB84253.1}; EC=6.4.1.1 {ECO:0000313|EMBL:AEB84253.1};; EC=6.4.1.4 {ECO:0000313|EMBL:AEB84253.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Methylcrotonoyl-CoA carboxylase, Pyruvate carboxylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6E4_ALIDK
rbh
|
|
S22_scaffold_123_curated_23
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25108..25434)
|
transposase n=1 Tax=Xanthobacteraceae RepID=UPI00037391E4
transposase
Transposase {ECO:0000313|EMBL:AHD02249.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohalidivorans DSM 14336.;"
|
|
S22_scaffold_123_curated_24
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26118..26663
|
Transcriptional regulator, TetR family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQE7_XANP2
rbh
TetR family transcriptional regulator
rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABS70243.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
S22_scaffold_123_curated_25
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26660..27106
|
Cobalamin B12-binding domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQE6_XANP2
cobalamin B12-binding domain-containing protein
Cobalamin B12-binding domain protein {ECO:0000313|EMBL:ABS70242.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
S22_scaffold_123_curated_26
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27103..28782
|
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:ABS70241.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ABS70241.1};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQE5_XANP2
rbh
methylmalonyl-CoA mutase, large subunit
rbh
|
|
S22_scaffold_123_curated_27
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28792..29775
|
LAO/AO transport system ATPase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQE4_XANP2
rbh
LAO/AO transport system ATPase
rbh
LAO/AO transport system ATPase {ECO:0000313|EMBL:ABS70240.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
S22_scaffold_123_curated_28
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29772..30233
|
Phenylacetic acid degradation protein PaaD n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQE3_XANP2
phenylacetic acid degradation protein PaaD
Phenylacetic acid degradation protein PaaD {ECO:0000313|EMBL:ABS70239.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
S22_scaffold_123_curated_29
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30272..31501
|
Putative phenylacetate-CoA ligase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQE2_XANP2
rbh
phenylacetate-CoA ligase
rbh
Putative phenylacetate-CoA ligase {ECO:0000313|EMBL:ABS70238.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
S22_scaffold_123_curated_30
unknown
|
Not on your lists |
comp(31402..31629)
|
This feature has no annotations |