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S22_scaffold_39_curated

Search features with annotation key words

Displaying items 1-30 of 253 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S22_scaffold_39_curated_1
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..98)
DNA (96bp) protein (32aa)
elongation factor Tu n=1 Tax=Xanthobacteraceae RepID=UPI00036F3EE1
elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S22_scaffold_39_curated_2
unknown

Not on your lists

427..1044
DNA (618bp) protein (206aa)

This feature has no annotations

S22_scaffold_39_curated_3
Monoraphidium neglectum, Monoraphidium, Sphaeropleales, Chlorophyceae, Chlorophyta, Viridiplantae

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comp(1071..1865)
DNA (795bp) protein (265aa)
ABC-type amino acid transport/signal transduction system, periplasmic component n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8GUI2_DEIGI
Uncharacterized protein {ECO:0000313|EMBL:KIZ07764.1}; TaxID=145388 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium.;" source="Monoraphidium neglectum.;"
fliY; ABC-type amino acid transport/signal transduction system, periplasmic component
S22_scaffold_39_curated_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2441..3871
DNA (1431bp) protein (477aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HY88_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54298.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
S22_scaffold_39_curated_5
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4004..4615
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IC49_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS65592.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_39_curated_trna_3
unknown

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comp(4910..4980)
DNA (71bp)
transferRNA Gly
S22_scaffold_39_curated_trna_2
unknown

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comp(5110..5197)
DNA (88bp)
transferRNA Tyr
S22_scaffold_39_curated_6
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5498..6355
DNA (858bp) protein (286aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKP0_XANP2 rbh
RNA methyltransferase rbh
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ABS68583.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_39_curated_7
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6682..8349
DNA (1668bp) protein (556aa)
Major facilitator superfamily MFS_1 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKN9_XANP2 rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABS68582.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
major facilitator transporter rbh
S22_scaffold_39_curated_trna_1
unknown

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8489..8560
DNA (72bp)
transferRNA Thr
S22_scaffold_39_curated_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8903..9124
DNA (222bp) protein (74aa)
High-affinity nickel-transporter n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKT8_XANP2
high-affinity nickel-transporter
High-affinity nickel-transporter {ECO:0000313|EMBL:ABS68631.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_39_curated_9
unknown

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9447..9605
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A5E4C
S22_scaffold_39_curated_10
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10517..10729
DNA (213bp) protein (71aa)
Cold-shock DNA-binding domain protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ELN1_METSB
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ACK50025.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
S22_scaffold_39_curated_11
unknown

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10935..11063
DNA (129bp) protein (43aa)

This feature has no annotations

S22_scaffold_39_curated_12
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11073..11378
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037AF887
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66805.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_39_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11406..11669
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036C055F
Uncharacterized protein {ECO:0000313|EMBL:KFC69229.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S22_scaffold_39_curated_14
unknown

Not on your lists

11766..11987
DNA (222bp) protein (74aa)

This feature has no annotations

S22_scaffold_39_curated_15
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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12224..20653
DNA (8430bp) protein (2810aa)
Protein ndvB n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FVK9_PHAMO rbh
cellobiose-phosphorylase rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
S22_scaffold_39_curated_16
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20740..21159
DNA (420bp) protein (140aa)
Putative transcriptional regulator, CopG family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKN1_XANP2
CopG family transcriptional regulator
Putative transcriptional regulator, CopG family {ECO:0000313|EMBL:ABS68574.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_39_curated_17
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21253..22503
DNA (1251bp) protein (417aa)
Esterase, PHB depolymerase family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKN0_XANP2 rbh
PHB depolymerase family esterase rbh
Esterase, PHB depolymerase family {ECO:0000313|EMBL:ABS68573.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_39_curated_18
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23517..24857)
DNA (1341bp) protein (447aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE83_XANP2 rbh
integral membrane sensor signal transduction histidine kinase rbh
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ABS66326.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_39_curated_19
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24854..25516)
DNA (663bp) protein (221aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE82_XANP2 rbh
two component transcriptional regulator rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABS66325.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_39_curated_20
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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25593..27440
DNA (1848bp) protein (616aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE81_XANP2 rbh
cytochrome c biogenesis protein transmembrane subunit rbh
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:ABS66324.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_39_curated_21
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27463..28092
DNA (630bp) protein (210aa)
DSBA oxidoreductase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE80_XANP2 rbh
DSBA oxidoreductase rbh
DSBA oxidoreductase {ECO:0000313|EMBL:ABS66323.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_39_curated_22
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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28092..28778
DNA (687bp) protein (229aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE79_XANP2 rbh
ErfK/YbiS/YcfS/YnhG family protein rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ABS66322.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_39_curated_23
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(28882..30972)
DNA (2091bp) protein (697aa)
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:ABS66321.1}; EC=1.1.99.3 {ECO:0000313|EMBL:ABS66321.1};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Gluconate 2-dehydrogenase (Acceptor) n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE78_XANP2 rbh
gluconate 2-dehydrogenase (acceptor) rbh
S22_scaffold_39_curated_24
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31767..32216
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2IV95_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJL52648.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
S22_scaffold_39_curated_25
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32131..32328)
DNA (198bp) protein (66aa)
Transposase n=1 Tax=Rhizobium sp. CF122 RepID=J2RQU2_9RHIZ
Transposase {ECO:0000313|EMBL:EJL54862.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
transposase IS3/IS911 family protein
S22_scaffold_39_curated_26
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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32506..33030
DNA (525bp) protein (175aa)
FecI-like protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HWH2_AZOC5
fecI; FecI-like protein
FecI-like protein {ECO:0000313|EMBL:BAF90429.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S22_scaffold_39_curated_27
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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33059..34024
DNA (966bp) protein (322aa)
Putative iron siderophore sensor protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HWH5_AZOC5 rbh
fecR; iron siderophore sensor protein rbh
Putative iron siderophore sensor protein {ECO:0000313|EMBL:BAF90430.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
Displaying items 1-30 of 253 in total

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