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S23_scaffold_344_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_344_curated_1
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

267..881
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D8C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET67843.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
S23_scaffold_344_curated_2
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1293..6236
DNA (4944bp) protein (1648aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WTF1_GEOS8 rbh
PAS/PAC sensor signal transduction histidine kinase rbh
S23_scaffold_344_curated_3
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

6419..6637
DNA (219bp) protein (73aa)
Putative phytochrome sensor protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WTF2_GEOS8
putative phytochrome sensor protein
Tax=RBG_13_Nitrospirae_41_22_curated
S23_scaffold_344_curated_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6615..7796
DNA (1182bp) protein (394aa)
Putative phytochrome sensor protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WTF2_GEOS8 rbh
Putative ATPase {ECO:0000313|EMBL:KCZ71707.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative phytochrome sensor protein rbh
S23_scaffold_344_curated_5
RLO_PLX_64_10, Bacteria

Not on your lists

7793..8176
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00035EB9A5
response regulator receiver protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S23_scaffold_344_curated_6
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8210..9901
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PPS3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB89702.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
response regulator receiver sensor signal transduction histidine kinase rbh
S23_scaffold_344_curated_7
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9926..11194)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N4M4_9CLOT rbh
putative iron-sulfur protein rbh
Tax=BJP_IG2157_Clostridiales_35_16
S23_scaffold_344_curated_8
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11391..12221
DNA (831bp) protein (277aa)
chemotaxis protein CheR (EC:2.1.1.80)
MCP methyltransferase, CheR-type n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJ20_ACEWD
Tax=BJP_IG2102_Clostridiales_34_350
S23_scaffold_344_curated_9
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12221..15187
DNA (2967bp) protein (989aa)
sensor histidine kinase (EC:2.7.13.3) rbh
Sensor histidine kinase n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJ21_ACEWD rbh
Tax=BJP_IG2102_Clostridiales_34_350
S23_scaffold_344_curated_10
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15177..17039
DNA (1863bp) protein (621aa)
Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJ22_ACEWD rbh
diguanylate cyclase and metal dependent phosphohydrolase rbh
Diguanylate cyclase and metal dependent phosphohydrolase {ECO:0000313|EMBL:AFA47385.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
S23_scaffold_344_curated_11
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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17189..17791
DNA (603bp) protein (201aa)
TetR family transcriptional regulator n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GFY6_EUBLK
TetR family transcriptional regulator
Tax=BJP_IG2069_Clostridiales_48_15
S23_scaffold_344_curated_12
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17788..18633
DNA (846bp) protein (282aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QYX3_SPHPG rbh
multidrug ABC transporter ATPase rbh
Tax=BJP_IG2069_Clostridiales_48_15
S23_scaffold_344_curated_13
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18630..19313
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QYX2_SPHPG
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
S23_scaffold_344_curated_14
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19310..20023
DNA (714bp) protein (238aa)
Putative uncharacterized protein id=2816155 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
S23_scaffold_344_curated_15
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20035..21015
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N8I8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB86485.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein rbh
S23_scaffold_344_curated_16
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21012..22442)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LFP0_ACEWD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFA46985.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
S23_scaffold_344_curated_17
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22660..22899
DNA (240bp) protein (80aa)
Protein Tlp homolog n=5 Tax=Clostridium RepID=TLP_CLOB6
tlp; small acid-soluble spore protein Tlp
Protein Tlp homolog {ECO:0000256|HAMAP-Rule:MF_01506}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;"
S23_scaffold_344_curated_18
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22992..23285
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2JJH3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY65947.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
S23_scaffold_344_curated_19
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23372..24280
DNA (909bp) protein (303aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Quinolinate synthetase complex, A subunit n=3 Tax=Anaerostipes RepID=B0MAU6_9FIRM rbh
quinolinate synthetase A rbh
S23_scaffold_344_curated_20
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24277..25602
DNA (1326bp) protein (442aa)
Aspartate oxidase (EC:1.4.3.16) rbh
FAD binding domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C6J8_9CLOT rbh
FAD binding domain protein {ECO:0000313|EMBL:EEG72333.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
S23_scaffold_344_curated_21
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25574..26434
DNA (861bp) protein (287aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19) rbh
Nicotinate-nucleotide pyrophosphorylase n=2 Tax=Lachnospiraceae RepID=R5YZB5_9FIRM rbh
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:CDA32175.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
S23_scaffold_344_curated_22
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26722..27123
DNA (402bp) protein (134aa)
Rhodanese domain protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJW9_CLOPH
rhodanese domain-containing protein
Tax=BJP_IG2102_Clostridiales_34_350
S23_scaffold_344_curated_23
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27592..28578
DNA (987bp) protein (329aa)
ABC transport system substrate-binding protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LK17_ACEWD rbh
ABC transporter substrate-binding protein rbh
ABC transport system substrate-binding protein {ECO:0000313|EMBL:AFA48771.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
S23_scaffold_344_curated_24
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28629..29522
DNA (894bp) protein (298aa)
ABC transport system permease protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LK16_ACEWD rbh
ABC transporter permease rbh
ABC transport system permease protein {ECO:0000313|EMBL:AFA48770.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
S23_scaffold_344_curated_25
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29523..30317
DNA (795bp) protein (265aa)
ABC transport system ATP-binding protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LK15_ACEWD rbh
ABC transporter ATP-binding protein rbh
ABC transport system ATP-binding protein {ECO:0000313|EMBL:AFA48769.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
S23_scaffold_344_curated_26
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

30560..31417
DNA (858bp) protein (286aa)
hypothetical protein, partial n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037BB3DC
ferredoxin
Tax=CG_OP9-01
S23_scaffold_344_curated_27
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31402..32151)
DNA (750bp) protein (250aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GED6_9FIRM rbh
DNA polymerase III
DNA polymerase III {ECO:0000313|EMBL:AHF06203.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
S23_scaffold_344_curated_28
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32315..32962
DNA (648bp) protein (216aa)
Channel protein, hemolysin III family n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HD93_ILYPC
hemolysin III family channel protein
Tax=BJP_IG2102_Clostridiales_34_350
S23_scaffold_344_curated_29
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32996..33811
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GL40_9FIRM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF08694.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
S23_scaffold_344_curated_30
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

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33901..35286
DNA (1386bp) protein (462aa)
ferredoxin hydrogenase id=1900871 bin=GWD2_Clostridiales_32_19 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85 rbh
hydrogenase large subunit domain protein rbh
Tax=GWD2_Clostridiales_32_19_curated
Displaying items 1-30 of 34 in total

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