ggKbase home page

S23_scaffold_761_curated_10

Organism: S23_Clostridiales_37_15_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(11541..12788)

Top 3 Functional Annotations

Value Algorithm Source
Type IV fimbrial assembly protein PilC n=1 Tax=Clostridium sp. CAG:352 RepID=R6RZ43_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 411.0
  • Bit_score: 376
  • Evalue 2.10e-101
  • rbh
Type IV fimbrial assembly protein PilC {ECO:0000313|EMBL:CDC39662.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 411.0
  • Bit_score: 376
  • Evalue 2.90e-101
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 412.0
  • Bit_score: 274
  • Evalue 4.10e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:352 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1248
GTGAAAATCTTGGTTTTTAGTTATAAAGCAGTGAATGCGAAAGGAAAAAAGGAGTCGGGAGAAATAAACGCAGATGATAAGTCTACGGCTATTTTTATGCTAAAAAGTAAAGGGTTGATCCCAATAGACATAAAGTTAATTAACAGTAAAGGCACCAACGCAAAGAAATCTTTTGGTGAGATAAGAATACTGGAAAAAGATATTCATGACGTTAGAATCAAAAAAAGCAAGATACTTGCAGTGTTAAATCAGTTTGCTATTATGATGAAGGCTGGAGTTTCCCTATCCCTTTGCATGGAGATTCTTGTTGACCAGGAAAAGGATAGAAGATTAAAAATGATTCTTGAGGAAATGAGAGTTGATATGTATTCAGGATTTACACTATCTTCTTCTATGATGAAATTTAAGGCCTTTAATGATATTACTGTAAATATTGTTTCTGCAGGTGAAGTAAACGGAAGGCTTGATATGGCCTTTGAACGGTGTGCTCAAATATTAGAAAATGAAGTAAATATTACAGCAAAGGTAAAAGGTGCAATTTCTTATCCACTGTTCTTGCTGGGACTTACAATTATAGTAGTAATCATATTAAATATGGTTGTTTTACCCGTCTTTACAGAAATGTTTCATAATATGGGGGCAGATTTGCCGGCGTTGACCAAATTTGTTATGGCTTCCTCTAATGTCTTAACTAAATTTTGGTATTTATTTGTCTTAGGCATTACTTCTCTCATAGTATCCTATGTTTATGGAAGAAAAAATTCGGAGAAATTTAGACTGAGAACTGATAGATTCAAACTAAGAATCCCATTGGTAGGCAGGCTATTACATAAGCTTTATATAGCAAGATTTTGCAGAATCATGGCATCTCTTGTGGATGCAGGAGTAGAAATTGTACATGCTCTCACTGTTTCGGCAAGCGTAATTCCAAACACCCATATGAAAATGTTTTTAAATCAGGTTTTAGAAGATGTTAAGGTTGGGGTACCTATCAATGTAGCTATGAGTAAATTTGCAATATTTGATCCACTGCTAGTATCCATGGTTCGGGTGGGAGAAGAATCAGGAATGCTTTATGATGTTCTAGACAAAATGGCCCAGCTTTTTGAAACCCAGACCGAGGCCCAAACAAAGCAATTAACTACACTTATTGAACCTGTCATGACAATCATAATAGCCTTAGTTGTTGGTACAGTAGTGATCTCGGTAGTAATGCCAATGTTTGGTCAGTATAATCTAATAATGTAG
PROTEIN sequence
Length: 416
VKILVFSYKAVNAKGKKESGEINADDKSTAIFMLKSKGLIPIDIKLINSKGTNAKKSFGEIRILEKDIHDVRIKKSKILAVLNQFAIMMKAGVSLSLCMEILVDQEKDRRLKMILEEMRVDMYSGFTLSSSMMKFKAFNDITVNIVSAGEVNGRLDMAFERCAQILENEVNITAKVKGAISYPLFLLGLTIIVVIILNMVVLPVFTEMFHNMGADLPALTKFVMASSNVLTKFWYLFVLGITSLIVSYVYGRKNSEKFRLRTDRFKLRIPLVGRLLHKLYIARFCRIMASLVDAGVEIVHALTVSASVIPNTHMKMFLNQVLEDVKVGVPINVAMSKFAIFDPLLVSMVRVGEESGMLYDVLDKMAQLFETQTEAQTKQLTTLIEPVMTIIIALVVGTVVISVVMPMFGQYNLIM*