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S23_scaffold_761_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_761_curated_1
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..813
DNA (813bp) protein (271aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z8L1_9BACT
TRAP dicarboxylate transporter subunit DctM
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_761_curated_2
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(911..1702)
DNA (792bp) protein (264aa)
Myo-inositol catabolism protein IolB n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VU10_CLOBO
5-deoxyglucuronate isomerase {ECO:0000313|EMBL:KEI14498.1}; TaxID=1443122 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi B str. NCTC 9691.;"
myo-inositol catabolism IolB domain-containing protein
S23_scaffold_761_curated_3
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(1683..3605)
DNA (1923bp) protein (641aa)
dku:Desku_0164 aldehyde ferredoxin oxidoreductase (EC:1.2.7.5); K03738 aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] id=1247601 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aor6; tungsten-containing aldehyde ferredoxin oxidoreductase Aor (EC:1.2.7.5) rbh
Tax=RBG_16_Spirochaete_67_19_curated
S23_scaffold_761_curated_4
unknown

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comp(3764..4036)
DNA (273bp) protein (91aa)

This feature has no annotations

S23_scaffold_761_curated_5
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(4057..5061)
DNA (1005bp) protein (335aa)
Transporter n=2 Tax=Spirochaeta thermophila RepID=E0RQT3_SPITD
transporter
Tax=RBG_16_Spirochaete_67_19_curated
S23_scaffold_761_curated_6
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(5142..6116)
DNA (975bp) protein (325aa)
LacI family transcriptional regulator n=1 Tax=Paenibacillus mucilaginosus K02 RepID=I0BDG6_9BACL
LacI family transcriptional regulator
Tax=RBG_16_Spirochaete_67_19_curated
S23_scaffold_761_curated_7
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6298..7920)
DNA (1623bp) protein (541aa)
Two component transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I0K9_CLOCE rbh
AraC family transcriptional regulator rbh
Two component transcriptional regulator, AraC family {ECO:0000313|EMBL:ACL75584.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
S23_scaffold_761_curated_8
Paenibacillus sp. FSL R5-0345, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7913..9787)
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00035C1A08 rbh
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AIQ34611.1}; TaxID=1536770 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-0345.;"
S23_scaffold_761_curated_9
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(9855..11348)
DNA (1494bp) protein (498aa)
ABC-type sugar transport system, ATPase component n=2 Tax=Vibrio mimicus RepID=D2YKL7_VIBMI rbh
hypothetical protein rbh
Tax=RBG_16_Spirochaete_67_19_curated
S23_scaffold_761_curated_10
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11541..12788)
DNA (1248bp) protein (416aa)
Type IV fimbrial assembly protein PilC n=1 Tax=Clostridium sp. CAG:352 RepID=R6RZ43_9CLOT rbh
Type IV fimbrial assembly protein PilC {ECO:0000313|EMBL:CDC39662.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
type II secretion system protein
S23_scaffold_761_curated_11
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12807..13835)
DNA (1029bp) protein (343aa)
Pilus retraction protein PilT n=1 Tax=Clostridium sp. CAG:352 RepID=R6R9M3_9CLOT rbh
Pilus retraction protein PilT {ECO:0000313|EMBL:CDC39661.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
twitching motility protein rbh
S23_scaffold_761_curated_12
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13859..15541)
DNA (1683bp) protein (561aa)
Type IV pilus assembly protein TapB n=1 Tax=Clostridium sp. CAG:352 RepID=R6QUY8_9CLOT rbh
Type IV pilus assembly protein TapB {ECO:0000313|EMBL:CDC39660.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
type ii secretion system protein e rbh
S23_scaffold_761_curated_13
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15555..16265)
DNA (711bp) protein (237aa)
prepilin peptidase (EC:3.4.23.43)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPZ8_9FIRM
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_761_curated_14
unknown

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comp(16253..16885)
DNA (633bp) protein (211aa)

This feature has no annotations

Displaying 14 items

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