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S23_scaffold_399_curated

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_399_curated_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(282..1211)
DNA (930bp) protein (310aa)
porin id=12551222 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
porin
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1668..2147
DNA (480bp) protein (160aa)
ubiquinone biosynthesis protein id=12551221 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ubiquinone biosynthesis protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2201..2650)
DNA (450bp) protein (150aa)
OsmC family protein; K07397 putative redox protein id=12551220 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
OsmC family protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2968..4545
DNA (1578bp) protein (526aa)
threonine dehydratase (EC:4.3.1.19) rbh
Threonine dehydratase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUS0_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4609..5424
DNA (816bp) protein (272aa)
cobalamin synthase n=1 Tax=Acidovorax radicis RepID=UPI0002375500 rbh
cobalamin-5-phosphate synthase CobS rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5421..6005
DNA (585bp) protein (195aa)
phosphoglycerate mutase id=12551216 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
phosphoglycerate mutase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5998..7665)
DNA (1668bp) protein (556aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUF0_9BURK rbh
methyl-accepting chemotaxis sensory transducer rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_8
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7844..9739)
DNA (1896bp) protein (632aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
Phosphomethylpyrimidine synthase n=1 Tax=Acidovorax sp. CF316 RepID=J1EEX5_9BURK rbh
phosphomethylpyrimidine synthase ThiC rbh
S23_scaffold_399_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9997..10173)
DNA (177bp) protein (59aa)
hypothetical protein id=12551211 bin=BDI species=Curvibacter lanceolatus genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10198..11121)
DNA (924bp) protein (308aa)
UDP-3-0-acyl N-acetylglucosamine deacetylase; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] id=12551210 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
lpxC; UDP-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_11
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11213..12436)
DNA (1224bp) protein (408aa)
cell division protein FtsZ n=1 Tax=Acidovorax radicis RepID=UPI0002375512 rbh
cell division protein FtsZ rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S23_scaffold_399_curated_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12594..13823)
DNA (1230bp) protein (410aa)
cell division protein FtsA id=12551208 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
cell division protein Ftsa rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13856..14650)
DNA (795bp) protein (265aa)
polypeptide-transport-associated domain-containing protein id=12551207 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
polypeptide-transport-associated domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14647..15633)
DNA (987bp) protein (329aa)
ddl; d-alanine--d-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=12551206 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ddl; d-alanine--d-alanine ligase (EC:6.3.2.4) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15630..17063)
DNA (1434bp) protein (478aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8) id=12551205 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17060..18133)
DNA (1074bp) protein (358aa)
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227) rbh
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6U3_ACIDE rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_17
unknown

Not on your lists

comp(18130..18249)
DNA (120bp) protein (40aa)

This feature has no annotations

S23_scaffold_399_curated_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18246..19556)
DNA (1311bp) protein (437aa)
cell division protein FtsW; K03588 cell division protein FtsW id=12551203 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
cell division protein FtsW rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19553..21541)
DNA (1989bp) protein (663aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=12551202 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
UDP-N-acetylmuramoylalanine--D-glutamate ligase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21538..22716)
DNA (1179bp) protein (393aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13) id=12551201 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22710..24146)
DNA (1437bp) protein (479aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T635_ACIDE rbh
UDP-N-acetylmuramoylalanyl-d-glutamyl-2,6-diaminopimelate/d-alanyl-d-alanyl ligase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24137..25630)
DNA (1494bp) protein (498aa)
murE; UDP-N-acetylmuramoylalanyl-d-glutamate--2,6-diaminopimelate ligase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] id=12551198 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25630..27375)
DNA (1746bp) protein (582aa)
peptidoglycan glycosyltransferase id=12551197 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
peptidoglycan glycosyltransferase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27372..27668)
DNA (297bp) protein (99aa)
cell division protein FtsL; K03586 cell division protein FtsL id=12551196 bin=BDI species=Acidovorax citrulli genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cell division protein FtsL
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27672..28595)
DNA (924bp) protein (308aa)
16S rRNA m(4)C1402 methyltransferase id=12551195 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
16S rRNA m(4)C1402 methyltransferase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_26
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28605..29033)
DNA (429bp) protein (143aa)
Protein MraZ n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUG9_9BURK
cell division protein MraZ
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
S23_scaffold_399_curated_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29342..30655)
DNA (1314bp) protein (438aa)
hslU; ATP-dependent protease ATP-binding subunit HslU id=12551193 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hslU; ATP-dependent protease ATP-binding subunit HslU rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30747..31310)
DNA (564bp) protein (188aa)
ATP-dependent protease HslVU, peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] id=12551192 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ATP-dependent protease subunit HslV (EC:3.4.25.1) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_399_curated_29
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31375..32496)
DNA (1122bp) protein (374aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUH2_9BURK rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying 29 items

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