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S23_scaffold_358_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_358_curated_1
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133..351)
DNA (219bp) protein (73aa)
SlyX {ECO:0000313|EMBL:KJA11635.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
slyx family protein; K03745 SlyX protein id=12551757 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
slyx family protein
S23_scaffold_358_curated_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(469..816)
DNA (348bp) protein (116aa)
ribosomal subunit Interface protein id=12551758 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ribosomal subunit Interface protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_358_curated_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(969..2945)
DNA (1977bp) protein (659aa)
guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] id=12551759 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
guanylate cyclase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_358_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2926..6492)
DNA (3567bp) protein (1189aa)
Outer membrane receptor protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KKY0_9BURK rbh
exported protein, TonB-dependent receptor protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_358_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6679..7551
DNA (873bp) protein (291aa)
peptidase C26 n=1 Tax=Acidovorax avenae RepID=UPI0002F87F76 rbh
peptidase C26 rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_358_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7747..8907
DNA (1161bp) protein (387aa)
Alcohol dehydrogenase, iron-containing n=2 Tax=Burkholderia mallei RepID=A2RWS2_BURM9 rbh
iron-containing alcohol dehydrogenase family protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_358_curated_7
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8953..9963)
DNA (1011bp) protein (337aa)
AraC family transcriptional regulator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S3Z8_9BURK rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:KDP86102.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
Transcriptional regulator, AraC family
S23_scaffold_358_curated_8
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10110..11669
DNA (1560bp) protein (520aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
AMP-dependent synthetase and ligase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S3Z7_9BURK rbh
Fatty-acid--CoA ligase {ECO:0000313|EMBL:KDP86101.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
S23_scaffold_358_curated_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11700..12881
DNA (1182bp) protein (394aa)
Thiolase-like protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVY1_VARPE rbh
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16736.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
thiolase rbh
S23_scaffold_358_curated_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12896..13336
DNA (441bp) protein (147aa)
MaoC-like dehydratase n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RW91_COMTE
MaoC-like dehydratase {ECO:0000313|EMBL:EHN63438.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
acyl dehydratase
S23_scaffold_358_curated_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13349..13774
DNA (426bp) protein (142aa)
MaoC domain protein dehydratase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVY3_VARPE
maoc domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ADU36461.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
S23_scaffold_358_curated_12
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13793..14623
DNA (831bp) protein (277aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVY4_VARPE rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KDP86097.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
short-chain dehydrogenase/reductase sdr rbh
S23_scaffold_358_curated_13
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14628..15785
DNA (1158bp) protein (386aa)
Butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. CF316 RepID=J0K574_9BURK rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EJE49140.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
S23_scaffold_358_curated_14
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15782..16834
DNA (1053bp) protein (351aa)
alpha-methylacyl-CoA racemase (EC:5.1.99.4) rbh
carnitine dehydratase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002E3A07B rbh
Alpha-methylacyl-CoA racemase {ECO:0000313|EMBL:ELA00718.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
S23_scaffold_358_curated_15
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16841..17785
DNA (945bp) protein (315aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJR8_9BURK rbh
alpha/beta hydrolase fold protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
S23_scaffold_358_curated_16
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17920..18390)
DNA (471bp) protein (157aa)
peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax radicis RepID=UPI00023758B9
FKBP-type peptidylprolyl isomerase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_358_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18537..19592)
DNA (1056bp) protein (352aa)
Pirin domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4X4_9BURK rbh
Pirin domain-containing protein rbh
Pirin domain-containing protein {ECO:0000313|EMBL:AFU48262.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S23_scaffold_358_curated_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19827..20078)
DNA (252bp) protein (84aa)
hypothetical protein id=12550537 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_358_curated_19
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20235..20717)
DNA (483bp) protein (161aa)
GCN5 family acetyltransferase n=1 Tax=Acidovorax radicis RepID=UPI00023758D0
acetyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S23_scaffold_358_curated_20
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20801..21679)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023758D1 rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_358_curated_21
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21814..23466)
DNA (1653bp) protein (551aa)
PepSY-associated TM helix domain protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AWZ0_DELSC rbh
PepSY-associated TM helix domain protein {ECO:0000313|EMBL:EZP53039.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
PepSY-associated TM helix domain-containing protein rbh
S23_scaffold_358_curated_22
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23480..23794)
DNA (315bp) protein (105aa)
Putative membrane protein 71 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HXE9_ACHXA
hypothetical protein
Putative membrane protein 71 {ECO:0000313|EMBL:ADP18802.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
S23_scaffold_358_curated_23
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23775..24056)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AWZ2_DELSC
Uncharacterized protein {ECO:0000313|EMBL:KGD90096.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
hypothetical protein
S23_scaffold_358_curated_24
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24142..26259)
DNA (2118bp) protein (706aa)
TonB-dependent siderophore receptor n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5UAD4_ALCXX rbh
TonB-dependent receptor {ECO:0000313|EMBL:KGY26848.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
TonB-dependent receptor
S23_scaffold_358_curated_25
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26731..27513)
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTX6_9BURK rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
S23_scaffold_358_curated_26
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27510..28118)
DNA (609bp) protein (203aa)
Type 12 methyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTX5_9BURK rbh
Type 12 methyltransferase {ECO:0000313|EMBL:EHL24173.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
type 12 methyltransferase rbh
S23_scaffold_358_curated_27
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28466..28852)
DNA (387bp) protein (129aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R90_RHOFD
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABM35159.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
S23_scaffold_358_curated_28
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29162..30040)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI0003700F62
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ28608.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio; psychroerythus).;"
S23_scaffold_358_curated_29
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30398..31627
DNA (1230bp) protein (410aa)
exonuclease SbcD (EC:3.1.11.1) rbh
Exodeoxyribonuclease I subunit D n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ER5_DECAR rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
S23_scaffold_358_curated_30
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31624..35133
DNA (3510bp) protein (1170aa)
SMC protein, N-terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ER6_DECAR rbh
SMC protein, N-terminal rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
Displaying items 1-30 of 31 in total

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