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S23_scaffold_130_curated

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_130_curated_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..110)
DNA (108bp) protein (36aa)
Transposase, IS4 family n=2 Tax=Acidovorax sp. (strain JS42) RepID=A1W3L2_ACISJ
transposase, IS4 family protein
Transposase, IS4 family {ECO:0000313|EMBL:ABM40837.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
S23_scaffold_130_curated_2
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160..2574)
DNA (2415bp) protein (805aa)
RNA-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002375C6E rbh
RNA-binding S1 domain-containing protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S23_scaffold_130_curated_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2704..3564)
DNA (861bp) protein (287aa)
Histidine kinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4L6_ACIDE
Histidine kinase {ECO:0000313|EMBL:EER60588.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
signal transduction histidine kinase
S23_scaffold_130_curated_4
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3612..4397)
DNA (786bp) protein (262aa)
Two component LuxR family transcriptional regulator n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVZ1_9BURK rbh
two component LuxR family transcriptional regulator rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_130_curated_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5074..6093
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4L8_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER60590.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
S23_scaffold_130_curated_6
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6170..6580
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W7C5_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM33227.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
S23_scaffold_130_curated_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6886..8619
DNA (1734bp) protein (578aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4M0_ACIDE rbh
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:EER60592.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein rbh
S23_scaffold_130_curated_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8750..9952
DNA (1203bp) protein (401aa)
Sel1 domain protein repeat-containing protein id=1268586 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Sel1 domain-containing protein
Tax=GWE1_Burkholderiales_65_30_curated
S23_scaffold_130_curated_9
unknown

Not on your lists

comp(10095..10820)
DNA (726bp) protein (242aa)

This feature has no annotations

S23_scaffold_130_curated_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10888..11730
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003690EC7
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:GAD24996.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
Sel1 domain-containing protein
S23_scaffold_130_curated_11
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12222..12833
DNA (612bp) protein (204aa)
UPI0003A4FFFD related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003A4FFFD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_130_curated_12
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12840..16022)
DNA (3183bp) protein (1061aa)
response regulator receiver modulated diguanylate cyclase/phosphodiesterase id=12551830 bin=BDI species=Methylomicrobium album genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
response regulator receiver modulated diguanylate cyclase/phosphodiesterase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_130_curated_13
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16463..17041
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHJ5_9GAMM rbh
hypothetical protein rbh
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
S23_scaffold_130_curated_14
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17266..17808)
DNA (543bp) protein (181aa)
Methylated-DNA/protein-cysteine methyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8Z4_ACIDE
Methylated-DNA/protein-cysteine methyltransferase {ECO:0000313|EMBL:EER59049.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
methylated-DNA/protein-cysteine methyltransferase
S23_scaffold_130_curated_15
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17874..18779)
DNA (906bp) protein (302aa)
hypothetical protein id=12551831 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_130_curated_16
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19006..19944)
DNA (939bp) protein (313aa)
glutathione S-transferase id=12551832 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
glutathione S-transferase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_130_curated_17
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19941..20417)
DNA (477bp) protein (159aa)
GCN5-like N-acetyltransferase; K02348 ElaA protein id=12551833 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
gcn5-like n-acetyltransferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_130_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20738..21754)
DNA (1017bp) protein (339aa)
Alcohol dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I598_9BURK rbh
alcohol dehydrogenase rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:AFU46369.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S23_scaffold_130_curated_19
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21864..22316)
DNA (453bp) protein (151aa)
hypothetical protein id=12551835 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_130_curated_20
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22322..23113)
DNA (792bp) protein (264aa)
gluconate 5-dehydrogenase (EC:1.1.1.69) id=12551836 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
gluconate 5-dehydrogenase (EC:1.1.1.69) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_130_curated_21
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23355..25193)
DNA (1839bp) protein (613aa)
acyl-CoA dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375FD8 rbh
acyl-CoA dehydrogenase domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_130_curated_22
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25772..26947)
DNA (1176bp) protein (392aa)
acetyL-CoA acetyltransferase (EC:2.3.1.16) rbh
Acetyl-CoA acetyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2P4_ACIDE rbh
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
S23_scaffold_130_curated_23
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26976..28463)
DNA (1488bp) protein (496aa)
hypothetical protein; K13049 carboxypeptidase PM20D1 [EC:3.4.17.-] id=12550489 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
S23_scaffold_130_curated_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28481..30580)
DNA (2100bp) protein (700aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2P5_ACIDE rbh
3-hydroxyacyl-CoA dehydrogenase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_130_curated_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30771..31466)
DNA (696bp) protein (232aa)
ABC transporter n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVY3_9BURK rbh
ABC transporter rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_130_curated_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31468..32250)
DNA (783bp) protein (261aa)
ABC transporter id=12553270 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ABC transporter rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_130_curated_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32253..33566)
DNA (1314bp) protein (438aa)
inner-membrane translocator id=12553269 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
inner-membrane translocator rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_130_curated_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33571..34524)
DNA (954bp) protein (318aa)
Inner-membrane translocator n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2P9_ACIDE rbh
inner-membrane translocator rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_130_curated_29
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34597..35832)
DNA (1236bp) protein (412aa)
extracellular ligand-binding receptor id=12553266 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria rbh
extracellular ligand-binding receptor rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_130_curated_30
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35965..37602)
DNA (1638bp) protein (546aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZZ0_9BURK rbh
long-chain-fatty-acid--CoA ligase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying items 1-30 of 81 in total

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