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S24_scaffold_138_curated

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_138_curated_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..2060
DNA (2058bp) protein (686aa)
LuxR family transcriptional regulator n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B76329 rbh
Regulatory protein, LuxR {ECO:0000313|EMBL:EON22644.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
regulatory protein LuxR rbh
S24_scaffold_138_curated_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2255..4852)
DNA (2598bp) protein (866aa)
Phosphoenolpyruvate synthase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B708_STRRD rbh
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:ACZ87746.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
phosphoenolpyruvate synthase rbh
S24_scaffold_138_curated_3
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5009..5347)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q3G1_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD42002.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
S24_scaffold_138_curated_4
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5611..6036)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000364A597
Uncharacterized protein {ECO:0000313|EMBL:EWM17569.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
S24_scaffold_138_curated_5
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6076..6639
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00035C4F71
Regulatory protein, TetR {ECO:0000313|EMBL:CEL12697.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
S24_scaffold_138_curated_6
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6716..7180)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Gordonia araii NBRC 100433 RepID=G7H3Z6_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB25688.1}; TaxID=1077976 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans NBRC 16320 = JCM 10675.;"
S24_scaffold_138_curated_7
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7309..7713
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Nocardiopsis RepID=UPI00034B854E
Transcriptional regulator {ECO:0000313|EMBL:EFH30756.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
MarR family transcriptional regulator
S24_scaffold_138_curated_8
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7892..8845
DNA (954bp) protein (318aa)
ABC transporter related protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A7D6_CELGA rbh
ABC transporter {ECO:0000313|EMBL:KGM14898.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
ABC transporter related protein rbh
S24_scaffold_138_curated_9
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8872..9540
DNA (669bp) protein (223aa)
ABC transporter related protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UKP4_CELFN rbh
ABC transporter {ECO:0000313|EMBL:KGM14897.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
ABC transporter rbh
S24_scaffold_138_curated_10
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9563..12832
DNA (3270bp) protein (1090aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00037CA99B rbh
Putative permease {ECO:0000313|EMBL:CCH16883.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein rbh
S24_scaffold_138_curated_11
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12829..15579
DNA (2751bp) protein (917aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037D13AE rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEE46025.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
S24_scaffold_138_curated_12
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15643..16833)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037D4FAA rbh
Uncharacterized protein {ECO:0000313|EMBL:ETK34611.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
major facilitator superfamily protein
S24_scaffold_138_curated_13
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16996..17487
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z1B7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGM16392.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
S24_scaffold_138_curated_14
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17595..18017
DNA (423bp) protein (141aa)
Transcriptional regulator, MerR family n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BVL1_DESAD
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACS78225.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 /; VKM B-1763).;"
S24_scaffold_138_curated_15
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18065..19411)
DNA (1347bp) protein (449aa)
D-serine deaminase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PUB5_KRIFD rbh
D-serine deaminase rbh
D-serine deaminase {ECO:0000313|EMBL:ADB35166.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
S24_scaffold_138_curated_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19426..19830)
DNA (405bp) protein (135aa)
Putative endoribonuclease L-PSP n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RKA1_LEIAQ
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:ERK69326.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
endoribonuclease L-PSP
S24_scaffold_138_curated_17
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19902..20936)
DNA (1035bp) protein (345aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16) rbh
Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y6D4_THEBD rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM16188.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
S24_scaffold_138_curated_18
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20933..21961)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ASP6_STRRD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACZ88569.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
S24_scaffold_138_curated_19
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21949..23208)
DNA (1260bp) protein (420aa)
6-phospho-beta-glucosidase (EC:3.2.1.86) rbh
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000373F460 rbh
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KHK95757.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
S24_scaffold_138_curated_20
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23212..24057)
DNA (846bp) protein (282aa)
sugar ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B6B440 rbh
L-arabinose transport system permease protein AraQ {ECO:0000313|EMBL:KJL36486.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
sugar transport membrane protein rbh
S24_scaffold_138_curated_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24054..25058)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00035D4A01 rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ERK69161.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sn-glycerol-3-phosphate transport system permease protein ugpA rbh
S24_scaffold_138_curated_22
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25069..26403)
DNA (1335bp) protein (445aa)
Putative ABC transporter-binding protein {ECO:0000313|EMBL:KJL36484.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Maltotriose-binding protein; K02027 multiple sugar transport system substrate-binding protein id=7719406 bin=CNBR_ACT species=Actinoplanes sp. genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Maltotriose-binding protein rbh
S24_scaffold_138_curated_23
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26451..27635)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037DF410 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK95754.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ROK family transcriptional regulator
S24_scaffold_138_curated_24
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

28001..28477
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Propionibacterium acidifaciens F0233 RepID=U2QDA5_9ACTO
Tax=BJP_08E140C01_Actinomycetales_70_11
S24_scaffold_138_curated_25
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28572..30200)
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00035EE9AE rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
putative multidrug ABC transporter permease protein
S24_scaffold_138_curated_26
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30197..31129)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000367E433 rbh
ABC transporter {ECO:0000313|EMBL:KGM11806.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
putative multidrug ABC transporter ATP-binding protein rbh
S24_scaffold_138_curated_27
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31439..32059
DNA (621bp) protein (207aa)
Regulatory protein TetR n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6J0_CELFA
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:AEE45623.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
S24_scaffold_138_curated_28
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32153..33901
DNA (1749bp) protein (583aa)
MFS transporter (Fragment) n=1 Tax=Bacillus sp. EGD-AK10 RepID=U2ACW6_9BACI rbh
MFS transporter {ECO:0000313|EMBL:ERI40981.1}; Flags: Fragment;; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
EmrB/QacA subfamily drug resistance transporter rbh
S24_scaffold_138_curated_29
Streptomyces leeuwenhoekii, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34053..34814)
DNA (762bp) protein (254aa)
3-ketoacyl-ACP reductase n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037E92AF rbh
Uncharacterized oxidoreductase MexAM1_META1p0182 {ECO:0000313|EMBL:CQR62923.1}; TaxID=1437453 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces leeuwenhoekii.;"
3-ketoacyl-ACP reductase
S24_scaffold_138_curated_30
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34919..35617)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037D55BF
TetR family transcriptional regulator {ECO:0000313|EMBL:ETK31700.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
regulatory protein TetR
Displaying items 1-30 of 53 in total

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