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S24_scaffold_1042_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_1042_curated_1
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..790
DNA (789bp) protein (263aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; Flags: Fragment;; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
Pseudouridine synthase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZ20_CELFA rbh
pseudouridine synthase rbh
S24_scaffold_1042_curated_2
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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822..1955
DNA (1134bp) protein (378aa)
Prephenate dehydrogenase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZ21_CELFA rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR64856.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
Prephenate dehydrogenase rbh
S24_scaffold_1042_curated_3
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1958..2785
DNA (828bp) protein (276aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
cytidylate kinase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002DBC3B5 rbh
cytidylate kinase rbh
S24_scaffold_1042_curated_4
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2782..3507
DNA (726bp) protein (242aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZ23_CELFA rbh
phospholipid/glycerol acyltransferase rbh
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AEE46013.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
S24_scaffold_1042_curated_5
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3565..5178
DNA (1614bp) protein (538aa)
GTP-binding protein Der n=1 Tax=Cellulomonas sp. JC225 RepID=UPI000378C980 rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
ribosome-associated GTPase EngA rbh
S24_scaffold_1042_curated_6
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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5261..5953
DNA (693bp) protein (231aa)
Transcriptional regulator, GntR family n=1 Tax=Rhodococcus sp. EsD8 RepID=N1M222_9NOCA
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCW09582.1}; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
GntR family transcriptional regulator
S24_scaffold_1042_curated_7
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5950..7251
DNA (1302bp) protein (434aa)
Major facilitator superfamily MFS_1 n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BSA4_XYLCX rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACZ30596.1}; Flags: Precursor;; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
S24_scaffold_1042_curated_trna_1
unknown

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7276..7349
DNA (74bp)
transferRNA Pro
S24_scaffold_1042_curated_8
unknown

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comp(7711..7929)
DNA (219bp) protein (73aa)

This feature has no annotations

S24_scaffold_1042_curated_9
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8138..8779)
DNA (642bp) protein (214aa)
TetR family transcriptional regulator n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TKR4_9NOCA rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:ELB90566.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
TetR family transcriptional regulator rbh
S24_scaffold_1042_curated_10
unknown

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9133..9279
DNA (147bp) protein (49aa)

This feature has no annotations

S24_scaffold_1042_curated_11
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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9330..9485
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B60787
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:BAC70068.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
S24_scaffold_1042_curated_12
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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9607..9870
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8LCG9_FRASN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW09608.1}; Flags: Precursor;; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
S24_scaffold_1042_curated_13
unknown

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10086..10307
DNA (222bp) protein (74aa)

This feature has no annotations

S24_scaffold_1042_curated_14
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(10493..11494)
DNA (1002bp) protein (334aa)
Putative Diguanylate cyclase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F3M5_MODMB
diguanylate cyclase
Putative Diguanylate cyclase {ECO:0000313|EMBL:CCH90238.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Displaying 15 items

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