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S24_scaffold_1398_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_1398_curated_1
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3..257
DNA (255bp) protein (85aa)
Methionine import ATP-binding protein MetN {ECO:0000313|EMBL:EQB26502.1}; EC=3.6.3.- {ECO:0000313|EMBL:EQB26502.1};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
Phosphonate-transporting ATPase (EC:3.6.3.28)
ABC transporter related n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU31_9FIRM
S24_scaffold_1398_curated_2
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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334..1161
DNA (828bp) protein (276aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=5 Tax=Pelosinus fermentans RepID=I8RMQ5_9FIRM rbh
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase
S24_scaffold_1398_curated_3
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1179..1601
DNA (423bp) protein (141aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU34_9FIRM
(3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase
S24_scaffold_1398_curated_4
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1787..2608
DNA (822bp) protein (274aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387};; EC=2.3.1.129 {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00001267};; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU35_9FIRM rbh
S24_scaffold_1398_curated_5
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2662..3465
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU36_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAX46455.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
protein of unknown function DUF1009
S24_scaffold_1398_curated_6
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3612..4763
DNA (1152bp) protein (384aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
Lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU37_9FIRM rbh
S24_scaffold_1398_curated_7
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4760..6508
DNA (1749bp) protein (583aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:EQB26496.1}; EC=3.6.3.- {ECO:0000313|EMBL:EQB26496.1};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (EC:3.6.3.44)
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IKV5_9FIRM rbh
S24_scaffold_1398_curated_8
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6512..7813
DNA (1302bp) protein (434aa)
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein n=4 Tax=Pelosinus fermentans RepID=I8RAN6_9FIRM rbh
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein {ECO:0000313|EMBL:EIW15988.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
S24_scaffold_1398_curated_9
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7824..8954
DNA (1131bp) protein (377aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
Tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JQG4_9FIRM rbh
Displaying 9 items

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