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S24_scaffold_835_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_835_curated_1
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..246)
DNA (246bp) protein (82aa)
Ribonuclease J 1 {ECO:0000313|EMBL:EQB26700.1}; EC=3.1.-.- {ECO:0000313|EMBL:EQB26700.1};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
Ribonuclease J 1 n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0ICV2_9FIRM
Ribocuclease J
S24_scaffold_835_curated_2
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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720..1838
DNA (1119bp) protein (373aa)
Glycosyl transferase family 9 n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IWQ1_9FIRM rbh
Glycosyl transferase family 9 {ECO:0000313|EMBL:EQB28962.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
glycosyl transferase family 9
S24_scaffold_835_curated_3
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1923..3188
DNA (1266bp) protein (422aa)
Peptidase family M20/M25/M40 n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XV22_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KGR80091.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
S24_scaffold_835_curated_4
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3372..5003
DNA (1632bp) protein (544aa)
Glutamate synthase (NADPH) subunit {ECO:0000313|EMBL:EQB26707.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EQB26707.1};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
Glutamate synthase (NADPH) subunit n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IQE9_9FIRM rbh
ferredoxin-dependent glutamate synthase rbh
S24_scaffold_835_curated_5
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5274..6530
DNA (1257bp) protein (419aa)
Uronate isomerase {ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|SAAS:SAAS00013438};; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TLQ7_ALKMQ rbh
hypothetical protein rbh
S24_scaffold_835_curated_6
Pseudothermotoga thermarum, Pseudothermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

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6627..7736
DNA (1110bp) protein (370aa)
Peptidase M24 n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YYQ3_9THEM rbh
peptidase M24 rbh
Peptidase M24 {ECO:0000313|EMBL:AEH51087.1}; TaxID=688269 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudothermotoga.;" source="Pseudothermotoga thermarum DSM 5069.;"
S24_scaffold_835_curated_7
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7748..8773
DNA (1026bp) protein (342aa)
Oxidoreductase domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMT2_9FIRM rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:EAX48567.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
oxidoreductase domain-containing protein
S24_scaffold_835_curated_8
Selenomonas sp. FOBRC6, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9154..10227
DNA (1074bp) protein (358aa)
Transporter, major facilitator family protein n=1 Tax=Selenomonas sp. oral taxon 138 str. F0429 RepID=L1N439_9FIRM rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:EJO23417.1}; TaxID=936572 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. FOBRC6.;"
Hexuronate transporter
S24_scaffold_835_curated_9
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10472..11746
DNA (1275bp) protein (425aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRB9_9FIRM rbh
homoaconitate hydratase family protein rbh
S24_scaffold_835_curated_10
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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11746..12243
DNA (498bp) protein (166aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
3-isopropylmalate dehydratase small subunit 1, putative (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRC0_9FIRM
S24_scaffold_835_curated_11
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12324..13346)
DNA (1023bp) protein (341aa)
Putative transcriptional regulator, GntR family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TNG5_ALKMQ rbh
Strain NCTC 7096 contig_242, whole genome shotgun sequence {ECO:0000313|EMBL:KIV52167.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus migulanus (Bacillus migulanus).;"
GntR family transcriptional regulator rbh
Displaying 11 items

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