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S28_scaffold_756_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_756_curated_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..312
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQU5_9BACT id=720028 bin=RAAC39 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC39 organism_group=Ignavibacteria
Uncharacterized protein {ECO:0000313|EMBL:KIC92104.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
S28_scaffold_756_curated_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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652..990
DNA (339bp) protein (113aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
S28_scaffold_756_curated_3
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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1234..1683
DNA (450bp) protein (150aa)
hypothetical protein id=717843 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
S28_scaffold_756_curated_4
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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1911..2663
DNA (753bp) protein (251aa)
Short-chain dehydrogenase/reductase SDR id=2112669 bin=GWB2_Chloroflexi_54_36 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81 rbh
short-chain dehydrogenase/reductase SDR rbh
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
S28_scaffold_756_curated_5
unknown

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comp(3026..3535)
DNA (510bp) protein (170aa)

This feature has no annotations

S28_scaffold_756_curated_6
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3603..3995)
DNA (393bp) protein (131aa)
TonB-like protein id=4115044 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
TonB-like protein
Tax=RBG_16_Ignavibacteria_35_7_curated
S28_scaffold_756_curated_7
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4292..5722)
DNA (1431bp) protein (477aa)
Outer membrane adhesin like proteiin id=3889282 bin=GWF2_Bacteroidetes_49_14 species=Beggiatoa sp. SS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) rbh
hypothetical protein
Tax=GWF2_Bacteroidetes_49_14_curated
S28_scaffold_756_curated_8
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6018..7004)
DNA (987bp) protein (329aa)
Putative transcriptional regulator id=1993131 bin=GWB2_Bacteroidetes_32_14 species=Cellvibrio sp. BR genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
helix-turn-helix, AraC type
Tax=RBG_16_Ignavibacteria_34_14_curated
S28_scaffold_756_curated_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7396..8781
DNA (1386bp) protein (462aa)
hypothetical protein n=2 Tax=Aminicenantes RepID=UPI0003731FEA rbh
Peptidase S41 {ECO:0000313|EMBL:KGJ91696.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio psychroerythus).;"
peptidase S41
S28_scaffold_756_curated_10
unknown

Not on your lists

comp(9190..9315)
DNA (126bp) protein (42aa)
transmembrane_regions id=717825 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Displaying 10 items

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